ggKbase home page

scnpilot_solids1_trim150_scaffold_2569_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2569_curated_1
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..294)
DNA (294bp) protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN50516.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Uncharacterized protein id=2647744 bin=GWF1_Xanthomonadales_69_6 species=Simiduia agarivorans genus=Simiduia taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein; K07136
scnpilot_solids1_trim150_scaffold_2569_curated_2
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(303..1193)
DNA (891bp) protein (297aa)
metallo-beta-lactamase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FAD6CC
Metallo-beta-lactamase {ECO:0000313|EMBL:KGM56007.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
beta-lactamase
scnpilot_solids1_trim150_scaffold_2569_curated_3
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1218..2939)
DNA (1722bp) protein (574aa)
ggt; gamma-glutamyltranspeptidase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2]
Gamma-glutamyltranspeptidase n=2 Tax=Xanthomonas campestris pv. citri RepID=Q8PJK8_XANAC
Gamma-glutamyltransferase {ECO:0000313|EMBL:AHY59426.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_2569_curated_4
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2936..3196)
DNA (261bp) protein (87aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WS94_PSEUU
4Fe-4S ferredoxin, iron-sulfur binding {ECO:0000313|EMBL:KGQ18540.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
scnpilot_solids1_trim150_scaffold_2569_curated_5
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3287..3838)
DNA (552bp) protein (184aa)
Uncharacterized protein n=3 Tax=Stenotrophomonas maltophilia RepID=I0KMK5_STEMA
Signal peptide protein {ECO:0000313|EMBL:KGQ18541.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2569_curated_6
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3835..4335)
DNA (501bp) protein (167aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase n=1 Tax=Xanthomonas campestris pv. campestris (strain B100) RepID=COAD_XANCB
scnpilot_solids1_trim150_scaffold_2569_curated_7
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4340..5002)
DNA (663bp) protein (221aa)
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
methyltransferase (EC:2.1.1.-); K08316 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
methyltransferase n=1 Tax=Xanthomonas sacchari RepID=UPI000262A885
scnpilot_solids1_trim150_scaffold_2569_curated_8
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5015..6121
DNA (1107bp) protein (369aa)
Signal recognition particle receptor FtsY n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WS90_PSEUU
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_2569_curated_9
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6189..7487
DNA (1299bp) protein (433aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM56000.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
id=2598463 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
scnpilot_solids1_trim150_scaffold_2569_curated_10
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7484..8086
DNA (603bp) protein (201aa)
A/G-specific adenine glycosylase; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-]
DNA glycosylase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003070ECF
A/G-specific adenine glycosylase {ECO:0000313|EMBL:KGQ18546.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
Displaying 10 items

View Taxonomy