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scnpilot_solids1_trim150_scaffold_2364_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2364_curated_1
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1728
DNA (1728bp) protein (576aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWW8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFN45308.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2364_curated_2
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1725..2918
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWW7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFN45307.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2364_curated_3
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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2963..4096
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000348F179
LacI family transcriptional regulator
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_2364_curated_4
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4012..4365)
DNA (354bp) protein (118aa)
Cyclomaltodextrin glucanotransferase n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3DT94_STEMA
Cyclomaltodextrin glucanotransferase {ECO:0000313|EMBL:KGM53535.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
amyM; cyclomaltodextrin glucanotransferase
scnpilot_solids1_trim150_scaffold_2364_curated_5
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4358..5698)
DNA (1341bp) protein (447aa)
cyclomaltodextrin glucanotransferase n=1 Tax=Xanthomonas sacchari RepID=UPI000262B195
Cyclomaltodextrin glucanotransferase {ECO:0000313|EMBL:AJC45091.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
cyclomaltodextrin glucanotransferase
scnpilot_solids1_trim150_scaffold_2364_curated_6
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5707..7194)
DNA (1488bp) protein (496aa)
MFS transporter n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DA3ECB
major facilitator superfamily protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_2364_curated_7

Not on your lists

7359..8969
DNA (1611bp) protein (537aa)
alpha amylase catalytic subunit; K01187 alpha-glucosidase [EC:3.2.1.20]
Alpha-glucosidase n=1 Tax=uncultured bacterium RepID=S5ZCH6_9BACT
Alpha-glucosidase {ECO:0000313|EMBL:AGT18053.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_solids1_trim150_scaffold_2364_curated_8
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8985..11069
DNA (2085bp) protein (695aa)
glycoside hydrolase; K01187 alpha-glucosidase [EC:3.2.1.20]
Glycoside hydrolase 97 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WS11_PSEUU
Alpha-glucosidase {ECO:0000313|EMBL:AKC88413.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
scnpilot_solids1_trim150_scaffold_2364_curated_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10895..11770)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Xylella fastidiosa subsp. sandyi Ann-1 RepID=Q3QZU0_XYLFS
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2364_curated_10
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12005..14065
DNA (2061bp) protein (687aa)
TonB-denpendent receptor n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002FB5897
TonB-dependent receptor {ECO:0000313|EMBL:AKC87654.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
TonB-dependent receptor
scnpilot_solids1_trim150_scaffold_2364_curated_11
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14172..14825)
DNA (654bp) protein (218aa)
kdgA; KHG/KDPG aldolase (EC:4.1.2.14); K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
ketohydroxyglutarate aldolase n=1 Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AEE0D6
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_2364_curated_12
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14822..15835)
DNA (1014bp) protein (338aa)
glk; glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2]
Glucokinase n=1 Tax=Reinekea blandensis MED297 RepID=A4BGM8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGM53523.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
scnpilot_solids1_trim150_scaffold_2364_curated_13
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15832..17667)
DNA (1836bp) protein (612aa)
phosphogluconate dehydratase n=1 Tax=Nevskia ramosa RepID=UPI0003B74AB6
Phosphogluconate dehydratase {ECO:0000313|EMBL:KGO97705.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2364_curated_14
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17667..18368)
DNA (702bp) protein (234aa)
6-phosphogluconolactonase (EC:3.1.1.31); K01057 6-phosphogluconolactonase [EC:3.1.1.31]
UPI0003CFEB84 related cluster n=1 Tax=unknown RepID=UPI0003CFEB84
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_2364_curated_15
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18390..19847)
DNA (1458bp) protein (486aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]
glucose 6-phosphate dehydrogenase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003658833
scnpilot_solids1_trim150_scaffold_2364_curated_16
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20039..20503
DNA (465bp) protein (155aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacte
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA (EC:4.2.1.60); K01716 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.60]
3-hydroxydecanoyl-ACP dehydratase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003141FF8
Displaying 16 items

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