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scnpilot_solids1_trim150_scaffold_1258_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1258_curated_1
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1247)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KJF7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC00498.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
Methyl-accepting chemotaxis protein I (serine chemoreceptor protein); K03406 methyl-accepting chemotaxis protein
scnpilot_solids1_trim150_scaffold_1258_curated_2
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1609..4647)
DNA (3039bp) protein (1013aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KT39_9BURK
Diguanylate cyclase {ECO:0000313|EMBL:EYC51314.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
diguanylate cyclase/phosphodiesterase
scnpilot_solids1_trim150_scaffold_1258_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4817..5749)
DNA (933bp) protein (311aa)
cysteine synthase (EC:2.5.1.47)
Pyridoxal-5'-phosphate-dependent enzyme subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWA8_9GAMM
Pyridoxal-5'-phosphate-dependent enzyme subunit beta {ECO:0000313|EMBL:EIL91499.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_1258_curated_4
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5892..6110)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=4 Tax=Xanthomonas RepID=D2UDC6_XANAP
infA; initiation factor if-1 protein; K02518 translation initiation factor IF-1
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1258_curated_5
Xanthomonas hortorum, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6221..6961)
DNA (741bp) protein (247aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. carotae
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6); K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6]
Leucyl-phenylalanyl-tRNA-protein transferase n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZD70_9XANT
scnpilot_solids1_trim150_scaffold_1258_curated_6
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6958..8103)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00038040C2
hypothetical protein; K09919 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AER56533.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_1258_curated_7
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8107..8886)
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Xanthomonas campestris RepID=B0RLP1_XANCB
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids1_trim150_scaffold_1258_curated_8
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8897..9850)
DNA (954bp) protein (318aa)
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UAG9_XANAP
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1258_curated_9
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9995..11065
DNA (1071bp) protein (357aa)
L-alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase n=1 Tax=mine drainage metagenome RepID=T1A9Q9_9ZZZZ
Alanine dehydrogenase {ECO:0000313|EMBL:EYR69493.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
scnpilot_solids1_trim150_scaffold_1258_curated_10
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11111..13480
DNA (2370bp) protein (790aa)
cell division protein FtsK n=1 Tax=Xanthomonas sacchari RepID=UPI000262B0A5
Cell division protein FtsK {ECO:0000313|EMBL:EYR69492.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
ftsK; cell division protein ftsk; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
scnpilot_solids1_trim150_scaffold_1258_curated_11
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13590..14207
DNA (618bp) protein (206aa)
Outer-membrane lipoprotein carrier protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z3S3_XANCT
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
lolA; Outer membrane lipoprotein carrier protein LolA; K03634 outer membrane lipoprotein carrier protein
scnpilot_solids1_trim150_scaffold_1258_curated_12
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14237..14434
DNA (198bp) protein (66aa)
Recombination factor protein RarA n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TL46_STEMA
Recombination factor protein RarA {ECO:0000313|EMBL:AKC88024.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
AAA ATPase; K07478 putative ATPase
Displaying 12 items

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