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scnpilot_solids1_trim150_scaffold_2363_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2363_curated_1
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..779)
DNA (777bp) protein (259aa)
spermidine synthase (EC:2.5.1.16); K00797 spermidine synthase [EC:2.5.1.16]
Spermidine synthase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z2L0_XANCT
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
scnpilot_solids1_trim150_scaffold_2363_curated_2
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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949..2835
DNA (1887bp) protein (629aa)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
speA; biosynthetic arginine decarboxylase (EC:4.1.1.19); K01585 arginine decarboxylase [EC:4.1.1.19]
Biosynthetic arginine decarboxylase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z2R2_XANCT
scnpilot_solids1_trim150_scaffold_2363_curated_3
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2832..3959
DNA (1128bp) protein (376aa)
Acyltransferase n=2 Tax=Xanthomonas campestris pv. campestris RepID=Q4UPN5_XANC8
acyltransferase
Acyltransferase {ECO:0000313|EMBL:AEL05349.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;"
scnpilot_solids1_trim150_scaffold_2363_curated_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3990..4430)
DNA (441bp) protein (147aa)
putative oxidoreductase; K05886 serine 3-dehydrogenase [EC:1.1.1.276]
oxidoreductase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E2E48C
Putative oxidoreductase {ECO:0000313|EMBL:CAQ43995.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
scnpilot_solids1_trim150_scaffold_2363_curated_5
unknown

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4655..4867
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2363_curated_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4762..5520)
DNA (759bp) protein (253aa)
Cell division protein n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KIM7_STEMA
cell division protein
Cell division protein {ECO:0000313|EMBL:CCH10916.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
scnpilot_solids1_trim150_scaffold_2363_curated_7
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5520..7208)
DNA (1689bp) protein (563aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19]
Arginine--tRNA ligase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPQ9_PSEUU
scnpilot_solids1_trim150_scaffold_2363_curated_8
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7260..7934)
DNA (675bp) protein (225aa)
DNA repair protein RadC n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPR1_PSEUU
DNA repair protein RadC; K03630 DNA repair protein RadC
DNA repair protein RadC {ECO:0000313|EMBL:ADV26016.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_2363_curated_9
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8030..8587
DNA (558bp) protein (186aa)
dfp; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5]
phosphopantothenoylcysteine decarboxylase n=1 Tax=Xanthomonas arboricola RepID=UPI000313572A
Phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:KCW98906.1}; TaxID=69929 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni.;"
scnpilot_solids1_trim150_scaffold_2363_curated_10
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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8584..9255
DNA (672bp) protein (224aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5]
phosphopantothenoylcysteine decarboxylase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F5F1E9
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_2363_curated_11
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9252..9713
DNA (462bp) protein (154aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23]
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000376E569
scnpilot_solids1_trim150_scaffold_2363_curated_12
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9726..12080
DNA (2355bp) protein (785aa)
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPR4_PSEUU
Phosphomannomutase {ECO:0000313|EMBL:KGM51246.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
scnpilot_solids1_trim150_scaffold_2363_curated_13
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(12091..12780)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Xanthomonas arboricola RepID=UPI0003625237
Uncharacterized protein {ECO:0000313|EMBL:KIJ72672.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2363_curated_14
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12812..13141)
DNA (330bp) protein (110aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
pyrE; orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10]
orotate phosphoribosyltransferase n=1 Tax=Xanthomonas vasicola RepID=UPI00034BCE7F
Displaying 14 items

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