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scnpilot_solids1_trim150_scaffold_2577_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2577_curated_1
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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36..506
DNA (471bp) protein (157aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
protein-L-isoaspartate O-methyltransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B30CB3
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:KGM50899.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
scnpilot_solids1_trim150_scaffold_2577_curated_2
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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525..1856
DNA (1332bp) protein (444aa)
TolC family type I secretion outer membrane protein n=3 Tax=Stenotrophomonas maltophilia RepID=J7V918_STEMA
Membrane protein {ECO:0000313|EMBL:KGM54458.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
tolC; putative outer membrane protein; K12340 outer membrane channel protein
scnpilot_solids1_trim150_scaffold_2577_curated_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1882..3213)
DNA (1332bp) protein (444aa)
three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K214_STEMA
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein {ECO:0000313|EMBL:AEM52696.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
scnpilot_solids1_trim150_scaffold_2577_curated_4
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3294..4202
DNA (909bp) protein (303aa)
Lipid A biosynthesis lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; EC=2.3.1.241 {ECO:0000256|HAMAP-Rule:MF_01942};; Kdo(2)-lipid IV(A) lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
waaM; lipid a biosynthesis lauroyl acyltransferase (EC:2.3.1.-); K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
Probable lipid a biosynthesis lauroyl acyltransferase protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UC29_XANAP
scnpilot_solids1_trim150_scaffold_2577_curated_5
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4193..5515)
DNA (1323bp) protein (441aa)
Membrane protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTC0_PSEUP
membrane protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_2577_curated_6
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5512..6618)
DNA (1107bp) protein (369aa)
Glycosyltransferase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7G9U7_XANCT
Glycosyl transferase {ECO:0000313|EMBL:AJC47229.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
group 1 glycosyl transferase
scnpilot_solids1_trim150_scaffold_2577_curated_7
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6635..6883)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003040DDD
Zf-CHCC domain containing protein {ECO:0000313|EMBL:KGQ18262.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2577_curated_8
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6920..7627)
DNA (708bp) protein (236aa)
Pirin n=1 Tax=uncultured organism RepID=T1W4Z4_9ZZZZ
Pirin-related protein {ECO:0000313|EMBL:KGQ18261.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
pirin domain-containing protein; K06911
scnpilot_solids1_trim150_scaffold_2577_curated_9
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7632..7865)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000316BD1D
Polyisoprenoid-binding protein {ECO:0000313|EMBL:AHY60534.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
Displaying 9 items

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