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scnpilot_solids1_trim150_scaffold_1559_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1559_curated_1
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..647)
DNA (645bp) protein (215aa)
ribonuclease D; K03684 ribonuclease D [EC:3.1.13.5]
ribonuclease D, partial n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00037D93F2
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1559_curated_2
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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738..2591
DNA (1854bp) protein (618aa)
Sulfatase-modifying factor protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UUJ2_PSEUP
sulfatase-modifying factor protein
Sulfatase-modifying factor protein {ECO:0000313|EMBL:AER56283.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_1559_curated_3
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2666..3550
DNA (885bp) protein (295aa)
peptidase n=1 Tax=Xanthomonas RepID=UPI0003730482
Peptidase M48 Ste24p {ECO:0000313|EMBL:KGQ20752.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
peptidase M48 Ste24p
scnpilot_solids1_trim150_scaffold_1559_curated_4
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3656..4156)
DNA (501bp) protein (167aa)
membrane protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031442B4
Membrane protein {ECO:0000313|EMBL:KGM51742.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein; K09793 hypothetical protein
scnpilot_solids1_trim150_scaffold_1559_curated_5
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4258..4734)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7H288_XANCT
Uncharacterized protein {ECO:0000313|EMBL:ELQ12149.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
putative outer membrane antigen lipoprotein; K06077 outer membrane lipoprotein SlyB
scnpilot_solids1_trim150_scaffold_1559_curated_6
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4963..5418)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E0F0E8
Uncharacterized protein {ECO:0000313|EMBL:KGM55876.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1559_curated_7
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5542..6282)
DNA (741bp) protein (247aa)
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KGM54873.1}; EC=1.1.1.36 {ECO:0000313|EMBL:KGM54873.1};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
acetoacetyl-CoA reductase; K00023 acetoacetyl-CoA reductase [EC:1.1.1.36]
Acetoacetyl-CoA reductase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSI9_PSEUU
scnpilot_solids1_trim150_scaffold_1559_curated_8
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6324..7166)
DNA (843bp) protein (281aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; K01894 glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
glutamyl-Q tRNA(Asp) ligase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E11AEA
scnpilot_solids1_trim150_scaffold_1559_curated_9
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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7321..8178
DNA (858bp) protein (286aa)
htpX; protease htpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-]
Protease HtpX n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KQT2_STEMA
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1559_curated_10
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8253..10352)
DNA (2100bp) protein (700aa)
membrane protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00035FF96D
Membrane protein {ECO:0000313|EMBL:EYR70082.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1559_curated_11
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10391..11461)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZD81_9XANT
Lysyl-lysine 2,3-aminomutase {ECO:0000313|EMBL:KGQ20745.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
lysine 2;3-aminomutase
scnpilot_solids1_trim150_scaffold_1559_curated_12
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11523..12089
DNA (567bp) protein (189aa)
Elongation factor P n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSA7_PSEUU
translation elongation factor P; K02356 elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_1559_curated_13
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12093..12239
DNA (147bp) protein (49aa)
N-ethylammeline chlorohydrolase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E56B67
N-ethylammeline chlorohydrolase {ECO:0000313|EMBL:KGM51930.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
amidohydrolase
Displaying 13 items

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