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scnpilot_solids1_trim150_scaffold_2270_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2270_curated_1
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..509
DNA (507bp) protein (169aa)
Uncharacterized protein {ECO:0000313|EMBL:EYR68421.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
Uncharacterized protein id=2637987 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
scnpilot_solids1_trim150_scaffold_2270_curated_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(653..1834)
DNA (1182bp) protein (394aa)
3-methylitaconate isomerase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E239CE
3-methylitaconate isomerase {ECO:0000313|EMBL:AHY58112.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
AcnD-accessory protein PrpF; K09788 hypothetical protein
scnpilot_solids1_trim150_scaffold_2270_curated_3
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1896..3332)
DNA (1437bp) protein (479aa)
prpD; 2-methylcitrate dehydratase; K01720 2-methylcitrate dehydratase [EC:4.2.1.79]
2-methylcitrate dehydratase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URA0_PSEUP
2-methylcitrate dehydratase {ECO:0000313|EMBL:AER57092.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_2270_curated_4
Ferrimonas balearica, Ferrimonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3491..3823)
DNA (333bp) protein (111aa)
aconitase (EC:4.2.1.3 4.2.1.-); K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitase 2-methylcitrate dehydratase (Trans-methylaconitate-forming) {ECO:0000313|EMBL:ADN77855.1}; EC=4.2.1.- {ECO:0000313|EMBL:ADN77855.1};; EC=4.2.1.3 {ECO:0000313|EMBL:ADN77855.1};; TaxID=550540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Ferrimonadaceae; Ferrimonas.;" source="Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT).;"
Aconitase ;2-methylcitrate dehydratase (Trans-methylaconitate-forming) n=1 Tax=Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) RepID=E1SPN8_FERBD
scnpilot_solids1_trim150_scaffold_2270_curated_5
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4547..5503
DNA (957bp) protein (319aa)
Uncharacterized protein {ECO:0000313|EMBL:CEL30442.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
scnpilot_solids1_trim150_scaffold_2270_curated_6
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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6180..7190
DNA (1011bp) protein (337aa)
dusA; tRNA-dihydrouridine synthase a protein (EC:1.-.-.-); K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-]
tRNA-dihydrouridine synthase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SUT8_XANCT
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_2270_curated_7
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7187..8098
DNA (912bp) protein (304aa)
amidinotransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3A8A9
Amidinotransferase {ECO:0000313|EMBL:KGM53669.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2270_curated_8
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8214..8564
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F8D89E
Uncharacterized protein {ECO:0000313|EMBL:EYR68430.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2270_curated_9
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8604..8861
DNA (258bp) protein (86aa)
transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031D232F
two component winged helix family transcriptional regulator; K07660 two-component system, OmpR family, response regulator PhoP
Two-component system response regulator protein PhoP {ECO:0000313|EMBL:AEL05260.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;"
Displaying 9 items

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