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scnpilot_solids1_trim150_scaffold_1113_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1113_curated_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..555)
DNA (555bp) protein (185aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
glgB; 1,4-alpha-glucan-branching protein GlgB (EC:2.4.1.18); K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNI6_AFIFE
scnpilot_solids1_trim150_scaffold_1113_curated_2
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1241..3130
DNA (1890bp) protein (630aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C9T6_9XANT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme
scnpilot_solids1_trim150_scaffold_1113_curated_3
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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3182..4459
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002FA3AA0
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1113_curated_4
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4523..6847)
DNA (2325bp) protein (775aa)
pathogenicity protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00036A0154
Pathogenicity protein {ECO:0000313|EMBL:KGM54010.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein; K09800 hypothetical protein
scnpilot_solids1_trim150_scaffold_1113_curated_5
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8386..10248)
DNA (1863bp) protein (621aa)
Surface antigen (D15) n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WX89_PSEUU
Membrane protein {ECO:0000313|EMBL:KGM52732.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
surface antigen (D15); K07278 outer membrane protein
scnpilot_solids1_trim150_scaffold_1113_curated_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10316..10777)
DNA (462bp) protein (154aa)
Bacteriohemerythrin n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WUD2_PSEUU
hemerythrin-like metal-binding protein; K07216 hemerythrin
Bacteriohemerythrin {ECO:0000256|HAMAP-Rule:MF_00556}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_1113_curated_7
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10854..13019)
DNA (2166bp) protein (722aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
Glycyl-tRNA synthetase, beta subunit n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WX88_PSEUU
scnpilot_solids1_trim150_scaffold_1113_curated_8
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13131..14027)
DNA (897bp) protein (299aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14); K01878 glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
glycyl-tRNA synthetase n=1 Tax=Xanthomonas RepID=UPI000262AA49
scnpilot_solids1_trim150_scaffold_1113_curated_9
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14110..14823
DNA (714bp) protein (238aa)
Glutamine amidotransferase {ECO:0000313|EMBL:KGM54006.1}; EC=6.3.5.2 {ECO:0000313|EMBL:KGM54006.1};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
guaA2; glutamine amidotransferase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
Glutamine amidotransferase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SYU6_XANCT
scnpilot_solids1_trim150_scaffold_1113_curated_10
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14866..15792
DNA (927bp) protein (309aa)
Uncharacterized protein {ECO:0000313|EMBL:KGQ19148.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
id=2693738 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
scnpilot_solids1_trim150_scaffold_1113_curated_11
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15818..16144)
DNA (327bp) protein (109aa)
Sec-independent protein translocase protein TatC n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WX84_PSEUU
Sec-independent protein translocase, TatC subunit; K03118 sec-independent protein translocase protein TatC
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1113_curated_12
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16631..16948)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E58813
tatB; sec-independent protein translocase; K03117 sec-independent protein translocase protein TatB
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_1113_curated_13
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16967..17191)
DNA (225bp) protein (75aa)
Sec-independent protein translocase protein TatA n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C1N8_9XANT
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; Flags: Precursor;; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;"
tatA; twin arginine translocase protein A; K03116 sec-independent protein translocase protein TatA
scnpilot_solids1_trim150_scaffold_1113_curated_14
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17233..18051)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Xanthomonas arboricola RepID=UPI000315C381
Uncharacterized protein {ECO:0000313|EMBL:GAE55167.1}; TaxID=1418095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni MAFF 301420.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1113_curated_15
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18175..18780
DNA (606bp) protein (202aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hemH; ferrochelatase; K01772 ferrochelatase [EC:4.99.1.1]
ferrochelatase n=1 Tax=Xanthomonas sacchari RepID=UPI000262B014
Displaying 15 items

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