ggKbase home page

scnpilot_solids1_trim150_scaffold_3256_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3256_curated_1
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..318
DNA (318bp) protein (106aa)
carbamoyl-phosphate synthase L chain ATP-binding protein; K01968 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTJ0_PSEUU
3-methylcrotonyl-CoA carboxylase {ECO:0000313|EMBL:KGM51972.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
scnpilot_solids1_trim150_scaffold_3256_curated_2
unknown

Not on your lists

315..938
DNA (624bp) protein (208aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3256_curated_3
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

940..1839
DNA (900bp) protein (300aa)
pyruvate carboxyltransferase; K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KYQ4_9GAMM
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:KGM54821.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
scnpilot_solids1_trim150_scaffold_3256_curated_4
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1870..2355
DNA (486bp) protein (162aa)
acetyltransferase; K03828 putative acetyltransferase [EC:2.3.1.-]
acetyltransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B35903
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids1_trim150_scaffold_3256_curated_5
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2541..3311
DNA (771bp) protein (257aa)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KGM54822.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
3-hydroxyacyl-CoA dehydrogenase id=2555813 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
short-chain dehydrogenase/reductase SDR
scnpilot_solids1_trim150_scaffold_3256_curated_6
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3308..3610
DNA (303bp) protein (101aa)
NODE_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97388.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
scnpilot_solids1_trim150_scaffold_3256_curated_7
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3607..4173
DNA (567bp) protein (189aa)
Elongation factor P-like protein n=2 Tax=Xanthomonas campestris pv. translucens RepID=L0SVR8_XANCT
Elongation factor P-like protein {ECO:0000256|HAMAP-Rule:MF_00646, ECO:0000256|SAAS:SAAS00055120}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
elongation factor p-like protein; K02356 elongation factor P
scnpilot_solids1_trim150_scaffold_3256_curated_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4250..4834
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000347CF60
N-acetyltransferase (GCN5-related)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_3256_curated_9
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4907..6502)
DNA (1596bp) protein (532aa)
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor id=2683973 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Stenotrophomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; K02014 iron complex outermembrane recepter protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
Displaying 9 items

View Taxonomy