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scnpilot_solids1_trim150_scaffold_1777_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1777_curated_1
unknown

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30..293
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1777_curated_2
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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297..668
DNA (372bp) protein (124aa)
GntR family transcriptional regulator {ECO:0000313|EMBL:KGM54962.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
GntR family transcriptional regulator; K07979 GntR family transcriptional regulator
Transcriptional regulator, GntR family id=2540543 bin=GWF1_Xanthomonadales_69_6 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
scnpilot_solids1_trim150_scaffold_1777_curated_3
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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677..1540
DNA (864bp) protein (288aa)
multidrug ABC transporter ATP-binding protein n=3 Tax=Xanthomonas axonopodis RepID=UPI0003064431
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIJ71736.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
nodI; ABC transporter ATP-binding protein
scnpilot_solids1_trim150_scaffold_1777_curated_4
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1786..2592
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TJZ4_STEMA
Putative ABC transporter, permease protein {ECO:0000313|EMBL:KGQ20332.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1777_curated_5
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2619..3287
DNA (669bp) protein (223aa)
Putative secreted protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTX0_PSEUU
Uncharacterized protein {ECO:0000313|EMBL:AKC87791.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1777_curated_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3301..3993
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTX1_PSEUU
Uncharacterized protein {ECO:0000313|EMBL:AKC87790.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1777_curated_7
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4086..5414)
DNA (1329bp) protein (443aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTR1_PSEUU
scnpilot_solids1_trim150_scaffold_1777_curated_8
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5411..6523)
DNA (1113bp) protein (371aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
Histidinol-phosphate aminotransferase (EC:2.6.1.9)
histidinol-phosphate aminotransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B475DD
scnpilot_solids1_trim150_scaffold_1777_curated_9
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6525..7721)
DNA (1197bp) protein (399aa)
chorismate mutase; K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
Chorismate mutase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTR2_PSEUU
Prephenate dehydratase {ECO:0000313|EMBL:AKC87846.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
scnpilot_solids1_trim150_scaffold_1777_curated_10
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7714..8799)
DNA (1086bp) protein (362aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
phosphoserine aminotransferase (EC:2.6.1.52); K00831 phosphoserine aminotransferase [EC:2.6.1.52]
MFS transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031CCD7A
scnpilot_solids1_trim150_scaffold_1777_curated_11
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8919..9221)
DNA (303bp) protein (101aa)
polyhydroxyalkanoic acid synthase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000317294F
polyhydroxyalkanoic acid system protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1777_curated_12
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9286..10071
DNA (786bp) protein (262aa)
signal peptide protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EC17CF
Signal peptide protein {ECO:0000313|EMBL:AKC87842.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
FHA domain containing protein
scnpilot_solids1_trim150_scaffold_1777_curated_13
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10096..10821)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000372FD19
Uncharacterized protein {ECO:0000313|EMBL:AJC44902.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1777_curated_14
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11069..12130
DNA (1062bp) protein (354aa)
lectin subunit Beta n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B6EB90
Lectin subunit Beta {ECO:0000313|EMBL:KGQ19400.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
lectin subunit Beta
scnpilot_solids1_trim150_scaffold_1777_curated_15
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12206..12850
DNA (645bp) protein (215aa)
Putative polyhydroxyalcanoate_granule_associated_protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UAX0_XANAP
Poly granule associated protein {ECO:0000313|EMBL:EYR67436.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
polyhydroxyalcanoate granule-associated protein
scnpilot_solids1_trim150_scaffold_1777_curated_16
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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13015..13887
DNA (873bp) protein (291aa)
Putative_membrane_protein_pd-(D/e) xk_nuclease_superfamily n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UAX1_XANAP
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
Displaying 16 items

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