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scnpilot_solids1_trim150_scaffold_1688_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1688_curated_1
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..487)
DNA (486bp) protein (162aa)
Putative nitroreductase n=1 Tax=uncultured microorganism RepID=C3VNF0_9ZZZZ
Dehydrogenase {ECO:0000313|EMBL:KGM51258.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
SagB-type dehydrogenase domain
scnpilot_solids1_trim150_scaffold_1688_curated_2
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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589..891
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:KGQ20156.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
scnpilot_solids1_trim150_scaffold_1688_curated_3
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1114..3624)
DNA (2511bp) protein (837aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00037B1AA3
Adenylate cyclase {ECO:0000313|EMBL:KGQ20157.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1688_curated_4
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3632..4456)
DNA (825bp) protein (275aa)
Diguanylate cyclase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPP7_PSEUU
cAMP-binding protein {ECO:0000313|EMBL:KGQ20158.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
diguanylate cyclase
scnpilot_solids1_trim150_scaffold_1688_curated_5
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4793..6094)
DNA (1302bp) protein (434aa)
isocitrate lyase; K01637 isocitrate lyase [EC:4.1.3.1]
Isocitrate lyase {ECO:0000313|EMBL:KGM53989.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
isocitrate lyase id=2693620 bin=GWF1_Xanthomonadales_69_6 species=Pseudomonas geniculata genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
scnpilot_solids1_trim150_scaffold_1688_curated_6
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6144..7760)
DNA (1617bp) protein (539aa)
malate synthase A (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9]
malate synthase id=2693626 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1688_curated_7
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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8172..8840
DNA (669bp) protein (223aa)
Bacterial regulatory helix-turn-helix , LysR family protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XGF7_9XANT
transcriptional regulator, LysR family
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1688_curated_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(8925..9677)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000376FD8F
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
scnpilot_solids1_trim150_scaffold_1688_curated_9
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9864..11552)
DNA (1689bp) protein (563aa)
peptidase t2 asparaginase 2; K13051 beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5]
peptidase T n=1 Tax=Xanthomonas sacchari RepID=UPI00026300E5
Uncharacterized protein {ECO:0000313|EMBL:KFN51872.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Displaying 9 items

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