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scnpilot_solids1_trim150_scaffold_2011_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2011_curated_1
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..215
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. malvacearum str. GSPB2388 RepID=K8FSV8_9XANT
Uncharacterized protein {ECO:0000313|EMBL:EKQ58674.1}; TaxID=1127439 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. malvacearum str. GSPB2388.;"
scnpilot_solids1_trim150_scaffold_2011_curated_2
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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223..1071
DNA (849bp) protein (283aa)
diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7]
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
Diaminopimelate epimerase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WPE0_PSEUU
scnpilot_solids1_trim150_scaffold_2011_curated_3
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1068..1751
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Xanthomonadaceae RepID=UPI000299D131
DUF484 domain containing protein {ECO:0000313|EMBL:KGQ17994.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein; K09921 hypothetical protein
scnpilot_solids1_trim150_scaffold_2011_curated_4
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1772..2905
DNA (1134bp) protein (378aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25); K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
N-acetylglucosamine 6-phosphate deacetylase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031752B3
scnpilot_solids1_trim150_scaffold_2011_curated_5
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2909..4852)
DNA (1944bp) protein (648aa)
Permease n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIC0_METPP
High-affinity iron permease {ECO:0000313|EMBL:KGQ17891.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
pbrT; permease; K07243 high-affinity iron transporter
scnpilot_solids1_trim150_scaffold_2011_curated_6
unknown

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comp(4936..5862)
DNA (927bp) protein (309aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2011_curated_7
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6295..9870
DNA (3576bp) protein (1192aa)
Indolepyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:KGM54040.1}; EC=1.2.7.8 {ECO:0000313|EMBL:KGM54040.1};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
pyruvate/ketoisovalerate oxidoreductase; K04090 indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VRD5_STEMA
Displaying 7 items

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