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scnpilot_solids1_trim150_scaffold_2008_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2008_curated_1
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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112..918
DNA (807bp) protein (269aa)
TatD-related deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-]
preprotein translocase subunit TatD n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003773D47
TatD-related deoxyribonuclease {ECO:0000313|EMBL:ADV28896.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_2008_curated_2
unknown

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comp(980..1468)
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2008_curated_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1585..2304)
DNA (720bp) protein (240aa)
OmpA/MotB domain protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JZV8_STEMA
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AEM50209.1}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
scnpilot_solids1_trim150_scaffold_2008_curated_4
Xanthomonas perforans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2376..3146)
DNA (771bp) protein (257aa)
ABC transporter permease n=2 Tax=Xanthomonas RepID=G2LXS2_9XANT
ABC transporter permease; K09686 antibiotic transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=925776 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas perforans 91-118.;"
scnpilot_solids1_trim150_scaffold_2008_curated_5
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3143..4099)
DNA (957bp) protein (319aa)
ABC transporter {ECO:0000313|EMBL:KFL35985.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
ABC transporter related protein id=2862898 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
ABC transporter; K09687 antibiotic transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_2008_curated_6
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4189..4953
DNA (765bp) protein (255aa)
oxidoreductase FAD/NAD(P)-binding domain-containing protein; K03380 phenol 2-monooxygenase [EC:1.14.13.7]
phenol hydroxylase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035E873B
Phenol hydroxylase {ECO:0000313|EMBL:KGQ18400.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
scnpilot_solids1_trim150_scaffold_2008_curated_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5103..6254
DNA (1152bp) protein (384aa)
diguanylate cyclase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D7D304
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ACF53574.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
scnpilot_solids1_trim150_scaffold_2008_curated_8
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6408..6986)
DNA (579bp) protein (193aa)
Uncharacterized protein {ECO:0000313|EMBL:KGI78946.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
scnpilot_solids1_trim150_scaffold_2008_curated_9
unknown

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7502..7675
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2008_curated_10
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7672..8268
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WXF6_PSEUU
Uncharacterized protein {ECO:0000313|EMBL:KGM53150.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2008_curated_11
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8265..8690
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BIK6_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KGM53149.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
scnpilot_solids1_trim150_scaffold_2008_curated_12
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8687..8884
DNA (198bp) protein (66aa)
Cro/Cl family transcriptional regulator n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002FCF196
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:AKC86726.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
XRE family transcriptional regulator; K07729 putative transcriptional regulator
scnpilot_solids1_trim150_scaffold_2008_curated_13
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8930..9820
DNA (891bp) protein (297aa)
cysteine proteinase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5FE43
TAP domain-containing protein {ECO:0000313|EMBL:KGQ18401.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
TAP domain-containing protein
Displaying 13 items

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