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scnpilot_solids1_trim150_scaffold_5191_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_5191_curated_1
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..631)
DNA (630bp) protein (210aa)
GlcD; fad/fmn-containing dehydrogenase; K03777 D-lactate dehydrogenase [EC:1.1.1.28]
Fad/fmn-containing dehydrogenase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HDJ5_XANCT
Fad/fmn-containing dehydrogenase {ECO:0000313|EMBL:ELQ16140.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
scnpilot_solids1_trim150_scaffold_5191_curated_2
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(637..1020)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000372ACE7
hypothetical protein; K07460 putative endonuclease
UPF0102 protein Psesu_0628 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_5191_curated_3
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1007..2290)
DNA (1284bp) protein (428aa)
Putative lipoprotein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQN7_PSEUU
LppC superfamily protein {ECO:0000313|EMBL:KGQ18883.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
lipoprotein; K07121
scnpilot_solids1_trim150_scaffold_5191_curated_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2362..3186
DNA (825bp) protein (275aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
rRNA small subunit methyltransferase I; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KCH0_STEMA
scnpilot_solids1_trim150_scaffold_5191_curated_5
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3669..4433)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z6A4_XANCT
Uncharacterized protein {ECO:0000313|EMBL:EKU26440.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_5191_curated_6
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4751..5197
DNA (447bp) protein (149aa)
cell division protein MraZ n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B54357
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
cell division protein MraZ; K03925 MraZ protein
scnpilot_solids1_trim150_scaffold_5191_curated_7
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5194..6156
DNA (963bp) protein (321aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
mraW; S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0ST60_XANCT
scnpilot_solids1_trim150_scaffold_5191_curated_8
unknown

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6153..6215
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 8 items

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