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scnpilot_solids1_trim150_scaffold_1758_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1758_curated_1
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..133)
DNA (132bp) protein (44aa)
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1304892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis Xac29-
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Xanthomonas axonopodis pv. malvacearum str. GSPB2388 RepID=K8G3K8_9XANT
scnpilot_solids1_trim150_scaffold_1758_curated_2
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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261..1388
DNA (1128bp) protein (376aa)
hypothetical protein, partial n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B59A4A
hypothetical protein; K09938 hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1758_curated_3
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1391..2554
DNA (1164bp) protein (388aa)
Putative permease (PerM) family protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UQQ9_PSEUP
Permease {ECO:0000313|EMBL:KGQ17749.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
Putative permease (PerM) family protein
scnpilot_solids1_trim150_scaffold_1758_curated_4
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2556..3263
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Xanthomonas arboricola RepID=UPI00030F930E
Replication related protein {ECO:0000313|EMBL:GAE52460.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
hypothetical protein; K10763 DnaA-homolog protein
scnpilot_solids1_trim150_scaffold_1758_curated_5
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3260..3958)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034AAC8A
Nucleotidyl transferase {ECO:0000313|EMBL:ELQ00718.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
nucleotidyl transferase
scnpilot_solids1_trim150_scaffold_1758_curated_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3955..4959)
DNA (1005bp) protein (335aa)
aminoglycoside phosphotransferase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002FE6758
aminoglycoside phosphotransferase; K07102
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ADV26934.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_1758_curated_7
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5002..6420
DNA (1419bp) protein (473aa)
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; K16011 mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UQR3_PSEUP
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:KGQ17745.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
scnpilot_solids1_trim150_scaffold_1758_curated_8
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6635..7594)
DNA (960bp) protein (320aa)
cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47]
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
Cysteine synthase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UNC9_PSEUP
scnpilot_solids1_trim150_scaffold_1758_curated_9
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7628..9082)
DNA (1455bp) protein (485aa)
Siroheme synthase / Precorrin-2 oxidase (EC:1.3.1.76 2.1.1.107 4.99.1.4)
sirohydrochlorin ferrochelatase n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037DC5B7
Siroheme synthase {ECO:0000256|HAMAP-Rule:MF_01646}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
scnpilot_solids1_trim150_scaffold_1758_curated_10
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9232..10194
DNA (963bp) protein (321aa)
Putative RuBisCO transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D2F1_STEMA
LysR family transcriptional regulator {ECO:0000313|EMBL:EYR67200.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
cysB; transcriptional regulator CysB-like protein
scnpilot_solids1_trim150_scaffold_1758_curated_11
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10248..11006)
DNA (759bp) protein (253aa)
phosphoadenosine phosphosulfate reductase; K00390 phosphoadenosine phosphosulfate reductase [EC:1.8.4.8]
Phosphoadenosine phosphosulfate reductase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UND7_PSEUP
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids1_trim150_scaffold_1758_curated_12
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11006..11227)
DNA (222bp) protein (74aa)
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000256|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000256|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000256|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO:0000256|HAMAP-Rule:MF_01540};; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
sulfite reductase (NADPH) hemoprotein, beta-component; K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
sulfite reductase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002D9CDF7
Displaying 12 items

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