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scnpilot_solids1_trim150_scaffold_1599_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1599_curated_1
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1305)
DNA (1305bp) protein (435aa)
Ammonium transporter n=1 Tax=Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122 RepID=D4SZA6_9XANT
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=427081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122.;"
amtB; ammonium transporter; K03320 ammonium transporter, Amt family
scnpilot_solids1_trim150_scaffold_1599_curated_2
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1295..1633)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWT5_9GAMM
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:GAN45062.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
nitrogen regulatory protein P-II; K04751 nitrogen regulatory protein P-II 1
scnpilot_solids1_trim150_scaffold_1599_curated_3
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1646..2449)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU38_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGM54060.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1599_curated_4
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2731..4140)
DNA (1410bp) protein (470aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
glnA; glutamate--ammonia ligase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2]
glutamine synthetase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3A516
scnpilot_solids1_trim150_scaffold_1599_curated_5
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4332..5279
DNA (948bp) protein (316aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
undecaprenyl pyrophosphate phosphatase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
Undecaprenyl-diphosphatase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UUY3_PSEUP
scnpilot_solids1_trim150_scaffold_1599_curated_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5306..5881
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI0003675DC0
Uncharacterized protein {ECO:0000313|EMBL:AKC88254.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1599_curated_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6173..6796)
DNA (624bp) protein (208aa)
poly-beta-hydroxybutyrate polymerase domain-containing protein; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Poly-beta-hydroxybutyrate polymerase domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G4R5_ALIDK
Poly-beta-hydroxybutyrate polymerase domain-containing protein {ECO:0000313|EMBL:GAO23867.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_1599_curated_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6984..7592
DNA (609bp) protein (203aa)
Transcriptional regulator, TetR family n=3 Tax=Betaproteobacteria RepID=C4ZND8_THASP
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:GAO23866.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_1599_curated_9
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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7786..8205
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZND7_THASP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK53784.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
scnpilot_solids1_trim150_scaffold_1599_curated_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8233..9273
DNA (1041bp) protein (347aa)
transporter n=1 Tax=Dyella ginsengisoli RepID=UPI00034A4D02
secretion protein HlyD family protein; K01993 HlyD family secretion protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:GAO23864.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_1599_curated_11
Pseudomonas sp. BAY1663, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9275..11047
DNA (1773bp) protein (591aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K01990 ABC-2 type transport system ATP-binding protein
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa str. Stone 130 RepID=N2CNS5_PSEAI
ATP-binding protein {ECO:0000313|EMBL:EXF45001.1}; TaxID=1439940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. BAY1663.;"
scnpilot_solids1_trim150_scaffold_1599_curated_12
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11044..12093
DNA (1050bp) protein (350aa)
Putative transporter subunit: permease component of ABC superfamily n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LNX2_RALME
ybhS; putative ABC transporter permease; K09686 antibiotic transport system permease protein
Putative transporter subunit: permease component of ABC superfamily {ECO:0000313|EMBL:ABF08154.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
Displaying 12 items

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