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scnpilot_solids1_trim150_scaffold_1800_curated

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1800_curated_1

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comp(3..1805)
DNA (1803bp) protein (601aa)
MprB n=1 Tax=uncultured bacterium pTW3 RepID=B8PZX3_9BACT
Metalloprotease {ECO:0000313|EMBL:AGW45543.1}; TaxID=1403001 species="Bacteria; environmental samples.;" source="uncultured bacterium Lac36W.;"
peptidase M4 thermolysin
scnpilot_solids1_trim150_scaffold_1800_curated_2

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comp(2399..2950)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=uncultured bacterium pTW2 RepID=B8PZW3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGW45541.1}; TaxID=1403001 species="Bacteria; environmental samples.;" source="uncultured bacterium Lac36W.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1800_curated_3

Not on your lists

3060..3473
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium pTW3 RepID=B8PZX6_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACA34434.1}; TaxID=504467 species="Bacteria; candidate division WS6; environmental samples.;" source="uncultured bacterium pTW3.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1800_curated_4
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3498..4607)
DNA (1110bp) protein (370aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
NAD(P)(+) transhydrogenase (EC:1.6.1.2); K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2]
NAD(P) transhydrogenase subunit beta n=1 Tax=uncultured bacterium pTW3 RepID=B8PZX7_9BACT
scnpilot_solids1_trim150_scaffold_1800_curated_5
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4878..5174)
DNA (297bp) protein (99aa)
pyridine nucleotide transhydrogenase subunit alpha; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2]
NAD(P) transhydrogenase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F072EA
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_1800_curated_6
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5283..5900
DNA (618bp) protein (206aa)
RpoE n=1 Tax=uncultured bacterium pTW3 RepID=B8PZX9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EYR65823.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
RNA polymerase factor sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids1_trim150_scaffold_1800_curated_7
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5897..6280
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:AKC86051.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
scnpilot_solids1_trim150_scaffold_1800_curated_8
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6284..6721
DNA (438bp) protein (146aa)
Putative secreted protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVK9_PSEUU
Uncharacterized protein {ECO:0000313|EMBL:KGM53908.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1800_curated_9

Not on your lists

comp(6722..7600)
DNA (879bp) protein (293aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2); K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2]
NAD(P) transhydrogenase subunit alpha n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031AF18C
Pyridine nucleotide transhydrogenase {ECO:0000313|EMBL:AGW45532.1}; TaxID=1403001 species="Bacteria; environmental samples.;" source="uncultured bacterium Lac36W.;"
scnpilot_solids1_trim150_scaffold_1800_curated_10
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7897..8466
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium pTW3 RepID=B8PZY4_9BACT
Oxygen-insensitive NADPH nitroreductase {ECO:0000313|EMBL:KGQ19550.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
nitroreductase
scnpilot_solids1_trim150_scaffold_1800_curated_11
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8550..9437
DNA (888bp) protein (296aa)
exodeoxyribonuclease IX n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00036CF96A
Exodeoxyribonuclease IX {ECO:0000313|EMBL:AJC45802.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
exodeoxyribonuclease IX
scnpilot_solids1_trim150_scaffold_1800_curated_12
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9490..10032
DNA (543bp) protein (181aa)
nudF; putative ADP-ribose pyrophosphatase (EC:3.6.1.13); K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13]
NUDIX hydrolase n=1 Tax=uncultured bacterium pTW3 RepID=B8PZY6_9BACT
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KGM56673.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
scnpilot_solids1_trim150_scaffold_1800_curated_13

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comp(10037..10984)
DNA (948bp) protein (316aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=1403001 species="Bacteria; environmental samples.;" source="uncultured bacterium Lac36W.;"
proline iminopeptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000319E54B
proline iminopeptidase
scnpilot_solids1_trim150_scaffold_1800_curated_14
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11047..11880)
DNA (834bp) protein (278aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.
protoporphyrinogen oxidase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI0003742B65
scnpilot_solids1_trim150_scaffold_1800_curated_15
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12067..12630
DNA (564bp) protein (188aa)
ahpC; alkyl hydroperoxide reductase subunit C (EC:1.6.99.3); K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]
Peroxiredoxin n=2 Tax=Thauera RepID=N6YH45_9RHOO
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:AJW46992.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
scnpilot_solids1_trim150_scaffold_1800_curated_16
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12790..14370
DNA (1581bp) protein (527aa)
ahpF; alkyl hydroperoxide reductase subunit F (EC:1.8.1.-); K03387 alkyl hydroperoxide reductase subunit F [EC:1.6.4.-]
Alkyl hydroperoxide reductase subunit F n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIV9_9GAMM
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KGM56668.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
scnpilot_solids1_trim150_scaffold_1800_curated_17
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14374..14793
DNA (420bp) protein (140aa)
lactoylglutathione lyase n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002D32B6F
Biphenyl-2,3-diol 1,2-dioxygenase III-related protein {ECO:0000313|EMBL:EZP46032.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
ring-cleaving dioxygenase
scnpilot_solids1_trim150_scaffold_1800_curated_18
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14739..15383)
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Citreicella sp. SE45 RepID=D0D8I9_9RHOB
Putative uncharacterized protein {ECO:0000313|EMBL:EEX14554.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
scnpilot_solids1_trim150_scaffold_1800_curated_19

Not on your lists

comp(17268..17525)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=G0JYH9_STEMA
Uncharacterized protein {ECO:0000313|EMBL:AGW45516.1}; TaxID=1403001 species="Bacteria; environmental samples.;" source="uncultured bacterium Lac36W.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1800_curated_20
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17631..19376
DNA (1746bp) protein (582aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
glutaminyl-tRNA synthetase; K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18]
Glutamine--tRNA ligase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVP1_PSEUU
scnpilot_solids1_trim150_scaffold_1800_curated_21
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19378..19947
DNA (570bp) protein (190aa)
Cytosine/adenosine deaminase n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BFS3_9XANT
Nucleoside deaminase {ECO:0000313|EMBL:KHL58973.1}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. cannabis.;"
cytidine and deoxycytidylate deaminase family protein
scnpilot_solids1_trim150_scaffold_1800_curated_22
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19919..20980
DNA (1062bp) protein (354aa)
Ribosomal RNA large subunit methyltransferase M {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058276}; EC=2.1.1.186 {ECO:0000256|HAMAP-Rule:MF_01551};; 23S rRNA (cytidine2498-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01551}; 23S rRNA 2'-O-ribose methyltransferase RlmM {ECO:0000256|HAMAP-Rule:MF_01551}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
RNA 2'-O-ribose methyltransferase; K06968 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
23S rRNA methyltransferase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000304CC90
scnpilot_solids1_trim150_scaffold_1800_curated_23

Not on your lists

comp(21002..22204)
DNA (1203bp) protein (401aa)
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; K03184 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [EC:1.14.13.-]
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00036BF222
Uncharacterized protein {ECO:0000313|EMBL:AGW45511.1}; TaxID=1403001 species="Bacteria; environmental samples.;" source="uncultured bacterium Lac36W.;"
scnpilot_solids1_trim150_scaffold_1800_curated_24
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22201..23403)
DNA (1203bp) protein (401aa)
2-polyprenyl-6-methoxyphenol 4-hydroxylase; K03185 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
2-polyprenyl-6-methoxyphenol 4-hydroxylase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQK9_PSEUU
2-octaprenyl-6-methoxyphenyl hydroxylase {ECO:0000313|EMBL:AKC88368.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
scnpilot_solids1_trim150_scaffold_1800_curated_25

Not on your lists

23476..24045
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BRV1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AGW45509.1}; TaxID=1403001 species="Bacteria; environmental samples.;" source="uncultured bacterium Lac36W.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1800_curated_26
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24106..24657
DNA (552bp) protein (184aa)
adenosyl transferase; K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17]
ATP--cobalamin adenosyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030AFB65
ATP--cobalamin adenosyltransferase {ECO:0000313|EMBL:KGM53927.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
scnpilot_solids1_trim150_scaffold_1800_curated_27
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24683..25594
DNA (912bp) protein (304aa)
Acetoin utilization family protein n=1 Tax=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) RepID=Q2NZI8_XANOM
acetoin utilization family protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_1800_curated_28
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25696..27996
DNA (2301bp) protein (767aa)
LPS-assembly protein LptD n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQK5_PSEUU
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
organic solvent tolerance protein; K04744 LPS-assembly protein
scnpilot_solids1_trim150_scaffold_1800_curated_29
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(27927..28781)
DNA (855bp) protein (285aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ71840.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
scnpilot_solids1_trim150_scaffold_1800_curated_30
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28789..29427
DNA (639bp) protein (213aa)
SurA domain; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
Chaperone SurA n=2 Tax=Stenotrophomonas maltophilia RepID=B4SK43_STRM5
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Flags: Precursor;; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Displaying items 1-30 of 38 in total

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