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scnpilot_solids1_trim150_scaffold_2090_curated_4

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(3512..4612)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, rnd family, mfp subunit n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UT24_PSEUP similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 376.0
  • Bit_score: 304
  • Evalue 1.50e-79
efflux transporter, rnd family, mfp subunit similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 376.0
  • Bit_score: 304
  • Evalue 4.70e-80
Efflux transporter, rnd family, mfp subunit {ECO:0000313|EMBL:AER56089.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 376.0
  • Bit_score: 304
  • Evalue 2.10e-79

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Taxonomy

Pseudoxanthomonas spadix → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
ATGCGCCGTCTCCCCGCCGTTCTTCTCCTGACCTCCGCGCTGCTGGCGCTCACCGCCTGCGGCTCCTCCAACGACGCCGCGCCAATGGAAGCCGCCCCGCAGGCCGACGCCCAGGGCCGGATCCGCCTGAGCGCCGCGCAGACCGCCAACCTCGGCATCCAGCGCACCCCGGCGGTGGCTGCCGACAGCGTGCCGGTCACCGGCCTGCCGGCCGAGGTCACGGTGCCGCTGGCCTCCAGTGCGCAGGTGACCATGCCGTACGCCGGGGTGGTGACGCGGGTGCTGGTGGACGAAGGCGAGACCGTGCGCCGCGGCCAGCCGATGCTGCGGGTGCAGAGTCGCGAGCTGGTGGCGGTGCAGGCCGACTACGCCAGGGCCCGCGCCGAATCCGGGCTGGCGGCGCAGCAGGCCCAGCGCGACGCGCTGCTGCAACGCGAAGGGCTGATACCGGCCGCGCGCGCGCAGGAAAGCCGGGCGCGGGCACAGGTGGCCAGCGCCAGCCTGCAGCAGGCCGGTGCTTCGCTGGCGCAGCTGCGGCCCAGCGGCGGCGCGGCCGGCGAGTTCGAACTGCTGGCCCCGCAGGCCGGCCGTGTGGTGCACAGGCAGGTGGCGCCGGGACAGGCGCTGGAAGCGTTGGCCGCGGCCTTCACCCTCGCCAGCGACGACCGCCTGGACCTGGAATTCGCGGTGCCGGTGGAACTGGCGACGCAGCTGCGCGTCGGCCAGCCGGTGGCGCTGCCCGGCGGCGCCACGGCAAGCGTGGCGGCGGTGGGTGGCGACGCCGACGCCGGCGCCCAGAGCCTGCGCGTGCGCGCGCAGTTGGCTGCCGGCAGCGGGTTGCTGCCGGGCCAGCAGCTGGACGTGACCCTGCAGCTGCCGGCCCCCGCCGGCGCGGTGGCGGTGCCCGTGGGCGCGCTGCTGCAGGACGGCGATGGCCACCTGCTGTTCGTGCTCGAAGGCGATGCCTGGCGCGGCCTGCCGGTGCGCCTGCTGGGCGGCGACGGGCGCCACGCCATCGTCACCGGCGAAGGGCTGAGCGCCGGGCTGCCGGTGGCGAGCGCCGGCGCCAACCTGCTCAAGACCCTGACGGCGGCGGAGTAG
PROTEIN sequence
Length: 367
MRRLPAVLLLTSALLALTACGSSNDAAPMEAAPQADAQGRIRLSAAQTANLGIQRTPAVAADSVPVTGLPAEVTVPLASSAQVTMPYAGVVTRVLVDEGETVRRGQPMLRVQSRELVAVQADYARARAESGLAAQQAQRDALLQREGLIPAARAQESRARAQVASASLQQAGASLAQLRPSGGAAGEFELLAPQAGRVVHRQVAPGQALEALAAAFTLASDDRLDLEFAVPVELATQLRVGQPVALPGGATASVAAVGGDADAGAQSLRVRAQLAAGSGLLPGQQLDVTLQLPAPAGAVAVPVGALLQDGDGHLLFVLEGDAWRGLPVRLLGGDGRHAIVTGEGLSAGLPVASAGANLLKTLTAAE*