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scnpilot_solids1_trim150_scaffold_2090_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2090_curated_1
unknown

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comp(3..131)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2090_curated_2
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(128..433)
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UT26_PSEUP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AER56091.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_2090_curated_3
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(430..3507)
DNA (3078bp) protein (1026aa)
CzcA family heavy metal efflux protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UT25_PSEUP
Cytochrome C peroxidase {ECO:0000313|EMBL:KGM52875.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
CzcA family heavy metal efflux protein
scnpilot_solids1_trim150_scaffold_2090_curated_4
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3512..4612)
DNA (1101bp) protein (367aa)
Efflux transporter, rnd family, mfp subunit n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UT24_PSEUP
efflux transporter, rnd family, mfp subunit
Efflux transporter, rnd family, mfp subunit {ECO:0000313|EMBL:AER56089.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_2090_curated_5
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4711..6048)
DNA (1338bp) protein (446aa)
Histidine kinase A domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1D3_ALIDB
Uncharacterized protein {ECO:0000313|EMBL:KGM52877.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
histidine kinase a domain protein
scnpilot_solids1_trim150_scaffold_2090_curated_6
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6035..6700)
DNA (666bp) protein (222aa)
Winged helix family two component transcriptional regulator n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UT22_PSEUP
Transcriptional regulator {ECO:0000313|EMBL:KGM52878.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
winged helix family two component transcriptional regulator
scnpilot_solids1_trim150_scaffold_2090_curated_7
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6789..7859)
DNA (1071bp) protein (357aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CI30_XANCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL07575.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;"
scnpilot_solids1_trim150_scaffold_2090_curated_8
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7925..9094)
DNA (1170bp) protein (390aa)
rlmI; 50S m5C1962 methyltransferase RlmI; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
Oxidoreductase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L724_9GAMM
Oxidoreductase {ECO:0000313|EMBL:EYR69754.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
scnpilot_solids1_trim150_scaffold_2090_curated_9
unknown

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comp(9103..9285)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2090_curated_10
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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9322..9555
DNA (234bp) protein (78aa)
membrane protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00031CA083
Membrane protein {ECO:0000313|EMBL:KIJ71178.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
integral membrane protein TerC; K05794 tellurite resistance protein TerC
Displaying 10 items

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