ggKbase home page

scnpilot_solids1_trim150_scaffold_1564_curated_6

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(4158..5237)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI000381A39D similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 359.0
  • Bit_score: 422
  • Evalue 3.70e-115
Permease {ECO:0000313|EMBL:KGQ20835.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 359.0
  • Bit_score: 436
  • Evalue 4.60e-119
YjgP/YjgQ family permease; K07091 lipopolysaccharide export system permease protein similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 356.0
  • Bit_score: 417
  • Evalue 3.80e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGCCGAAGCTGGATCGCTACCTCAGCGCCGAGTTCGCCCGTGCCGTGCTAGCCGCGCTGGTGGTGCTGGGCATGGTCAGCCTGGGCGGCGTGTTCGCCGACCTGATCGGCGAGATGGCCGCCGGCAAGGTCCCGCCTGCGCTGCTGCTGTCACAGCTGGGCCTGCGCCTGCTCGGCTACCTGCCGCTGATCCTGCCGCTGGCACTGTTGCTGGGGCTGCTGCTGGCGGTGGGCCGGCTCTACCGCGATTCGGAAATGCACGTGCTGACCGCGGCCGGCGTGGGGCCGGTCCGGCTGCTGCGCCCGCTGCTGCTGGTGGCGGTGCCGGTGCTGCTGGCGATCGCCGCCTGTTCGCTGTGGCTGGGCCCCTGGGCGAACCGGCTGGCGCGCGGGATGGTGATCGAGGCCAACAAGAACCTGCTGGTGGCCGGGTTGGAGCCGGGCCGCTTCACGCCGATGGCCAGCGGCGGCGTGGCCTATGCCGGCGAGATGTCGAGCGACGGCACCAAGCTGGCGCGGGTGTTCATCTTCCGCGAGCGTGGCGACCGCATGGACGTGGCCACCGCCCGCAGCGGCGAGCTGTATCGCGACCAGGGCGCGCGGGTGCTGGCGCTGCTGGACGGTTTCCGGGTGGAAGGCCCGCTGGCGGGGCAGGCACTCGACTACCGGCTGATGCACTACGCCCGCAACGAGATGCAGCTGCCGGCGCCGGACGACCAGCGGCGCATGGATGACCCCGCTTTCAAGACCATCGGTGAACTGCTGGCGGATCCCGCCGCCCCGGCGCGCGCCGAGCTGCACTGGCGCATCGCGCCGCCGCTGCTGGCGCTGGCGTTCGCGCTGATGGCGCTGCCGATGGCGCGCAGTTCGCCGCGCCAGTCCCGCCACGGCGCACTGCTGCTGGCCTTCCTGGCCTATCTGGTGGGCATATTCCTGATGATCCTGGGCACCGAATGGCTGGCCACGGGCCAGCTGCCGCTGGCCGCCGGCCTGTGGTGGCTGCTGCTGCCGATGCTGGCGCTGGGTGCCTGGTTGTATGCCCGCGACGGCCGTGTGGCGCGGCCGTGGAGGCGTCGATGA
PROTEIN sequence
Length: 360
MPKLDRYLSAEFARAVLAALVVLGMVSLGGVFADLIGEMAAGKVPPALLLSQLGLRLLGYLPLILPLALLLGLLLAVGRLYRDSEMHVLTAAGVGPVRLLRPLLLVAVPVLLAIAACSLWLGPWANRLARGMVIEANKNLLVAGLEPGRFTPMASGGVAYAGEMSSDGTKLARVFIFRERGDRMDVATARSGELYRDQGARVLALLDGFRVEGPLAGQALDYRLMHYARNEMQLPAPDDQRRMDDPAFKTIGELLADPAAPARAELHWRIAPPLLALAFALMALPMARSSPRQSRHGALLLAFLAYLVGIFLMILGTEWLATGQLPLAAGLWWLLLPMLALGAWLYARDGRVARPWRRR*