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scnpilot_solids1_trim150_scaffold_1612_curated_17

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 15555..16697

Top 3 Functional Annotations

Value Algorithm Source
hemolysin D n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003657B5F similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 372.0
  • Bit_score: 428
  • Evalue 5.50e-117
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KGQ18989.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 356.0
  • Bit_score: 457
  • Evalue 1.60e-125
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 372.0
  • Bit_score: 428
  • Evalue 1.70e-117

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1143
ATGCGCCCATTGATCCCGGCCCCCGTTTCCCGCTTCCGTCGCGTGCTTCCGCTCGCCCGGCTCAGCCTGTTGGCCGTCGCCCTGGGGCTTGCCGCCTGCAAGGGTGGTGGCGCCGAGGGCGGCAAGGGCCCGGATGGCAAGGACCAGGCCAGCAAGGGGCCGGAGGCCATTCCGGTGGAGGTGGCCAAGGCGTCCACCCGCTCGATCTCCGCCAGCTACGCCGGCACCGCGCCGCTGGAAGCGCGCGCGGAATCGCAGGTGGTGGCGAAGACCTCAGGCATTGCGCTGCAGGTGTATGCCGACATCGGCCAGCAGGTCAGCGCCGGCCAGGCGTTGGTCCGCATCGATCGCGACCGCGCCACCTTGCAGGTCGCGCAGGCTGATGCGGAGGTGCGCAAGCTGGAGGCCAACTACCGGCGTTCCGCGCAGCTGCTGGATCAGAAGATGGTCAGCGTCAACGACGTCGACCAGCTGCGCTACAACCTCGAGAACGCGCGCGCACAGCTGCGCATGGCCAAGCTGGAACTGTCCTACGGCACGGTCAGCGCGCCGATCTCCGGCGTGGTGGCTTCGCGCAGCATCAAGCAGGGCAACCTGGTGCAGATCAATACGCCGATCTTCACCATCGTCGACATCTCGCGGCTGGAAGCCACGCTCAACGTGCCGGAGCGCGAAATCGAAACCCTGAAGGCCGGGCAGGCAGTGCAACTCACCGTGGACGCACTGCCGGGCAAGACCTTCGACGGCCGCATCGACCGGGTGTCGCCGGTGGTGGACTCCGGCAGCGGCACTTTCCGGGTGATCTGTGCCTTCGACGGGGGCGGACTGCTGCAGCCTGGCATGTTCGGACGCATCCGCATCAACTACGACCAGCGCGCCGATGCACTGGTGATCCCCCGCACCGCGCTGCTGGAAGACGGCGGTACGCCAGCGGTGTTCACGGTCAAGGGCGGCAAAGCCGTGCGCTCCGAGCTCAAGCTGGGTTACGTCGATGGCGAATGGGTAGAGGTTCGTGATGGCCTGCGCGCAGGCGACCCGGTGGTGGTGGCCGGCAAGTCCGCCCTGCGCGAAGGCAGCGCGGTCCAGGTGATCAATGACAAGGCTGCGCCCGCCCCGGCGCCTGCGAAGGTGGTCGCCAAATGA
PROTEIN sequence
Length: 381
MRPLIPAPVSRFRRVLPLARLSLLAVALGLAACKGGGAEGGKGPDGKDQASKGPEAIPVEVAKASTRSISASYAGTAPLEARAESQVVAKTSGIALQVYADIGQQVSAGQALVRIDRDRATLQVAQADAEVRKLEANYRRSAQLLDQKMVSVNDVDQLRYNLENARAQLRMAKLELSYGTVSAPISGVVASRSIKQGNLVQINTPIFTIVDISRLEATLNVPEREIETLKAGQAVQLTVDALPGKTFDGRIDRVSPVVDSGSGTFRVICAFDGGGLLQPGMFGRIRINYDQRADALVIPRTALLEDGGTPAVFTVKGGKAVRSELKLGYVDGEWVEVRDGLRAGDPVVVAGKSALREGSAVQVINDKAAPAPAPAKVVAK*