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scnpilot_solids1_trim150_scaffold_1612_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1612_curated_1
unknown

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2..121
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1612_curated_2
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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118..873
DNA (756bp) protein (252aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=925775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria ATCC 35937.;"
NADH dehydrogenase subunit C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BCB9_9XANT
scnpilot_solids1_trim150_scaffold_1612_curated_3
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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870..2180
DNA (1311bp) protein (437aa)
NADH dehydrogenase I subunit D (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3]
NADH dehydrogenase subunit D n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030D8859
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_1612_curated_4
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2177..2704
DNA (528bp) protein (176aa)
NADH-quinone oxidoreductase subunit E; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3]
NADH dehydrogenase subunit E n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031F5218
NADH dehydrogenase {ECO:0000313|EMBL:KGM57200.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
scnpilot_solids1_trim150_scaffold_1612_curated_5
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2704..4071
DNA (1368bp) protein (456aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3]
NADH-quinone oxidoreductase, F subunit {ECO:0000313|EMBL:ADV27682.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ADV27682.1};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
NADH dehydrogenase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000379F5A3
scnpilot_solids1_trim150_scaffold_1612_curated_6
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4068..6302
DNA (2235bp) protein (745aa)
NADH-quinone oxidoreductase subunit G; K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3]
NADH-quinone oxidoreductase, chain G n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WU32_PSEUU
NADH dehydrogenase subunit G {ECO:0000313|EMBL:EYR67808.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
scnpilot_solids1_trim150_scaffold_1612_curated_7
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6299..7393
DNA (1095bp) protein (365aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
respiratory-chain NADH dehydrogenase subunit 1; K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit H n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WU31_PSEUU
scnpilot_solids1_trim150_scaffold_1612_curated_8
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7390..7881
DNA (492bp) protein (164aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
nuoI; NADH-quinone oxidoreductase subunitI(nadh dehydrogenaseIsubunitI (ndh-1 subunitI (nuo9) oxidoreductase (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3]
NADH dehydrogenase subunit I n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030CA988
scnpilot_solids1_trim150_scaffold_1612_curated_9
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7895..8536
DNA (642bp) protein (214aa)
nuoJ; NADH dehydrogenase subunit J (EC:1.6.5.3); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3]
NADH dehydrogenase subunit J n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SST1_XANCT
NADH-ubiquinone oxidoreductase chain J {ECO:0000313|EMBL:KGQ19207.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
scnpilot_solids1_trim150_scaffold_1612_curated_10
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8533..8856
DNA (324bp) protein (108aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
NADH dehydrogenase subunit K (EC:1.6.5.3); K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit K n=19 Tax=Xanthomonas RepID=NUOK_XANAC
scnpilot_solids1_trim150_scaffold_1612_curated_11
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8861..10933
DNA (2073bp) protein (691aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3]
NADH:ubiquinone oxidoreductase subunit L n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002D84078
NADH-ubiquinone oxidoreductase chain L {ECO:0000313|EMBL:KGQ19209.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
scnpilot_solids1_trim150_scaffold_1612_curated_12
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10950..12476
DNA (1527bp) protein (509aa)
NADH:ubiquinone oxidoreductase subunit M n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B36E30
NADH-ubiquinone oxidoreductase chain M {ECO:0000313|EMBL:KGQ19210.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
nuoM; NADH:ubiquinone oxidoreductase subunit 4 (chain M)
scnpilot_solids1_trim150_scaffold_1612_curated_13
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12490..13944
DNA (1455bp) protein (485aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
nuoN; NADH dehydrogenase subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3]
NADH:ubiquinone oxidoreductase subunit N n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A481CF
scnpilot_solids1_trim150_scaffold_1612_curated_14
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14063..14383)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EEB6AD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV27922.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_1612_curated_15
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14456..14887)
DNA (432bp) protein (144aa)
cytochrome C biogenesis protein CcsA n=1 Tax=Xanthomonas RepID=UPI00035FAF6C
cytochrome c class I
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_1612_curated_16
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14896..15315)
DNA (420bp) protein (140aa)
Cytochrome C4 n=1 Tax=Xanthomonas campestris pv. campestris (strain B100) RepID=B0RSF1_XANCB
Cytochrome C {ECO:0000313|EMBL:KGM56362.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
cytochrome C4
scnpilot_solids1_trim150_scaffold_1612_curated_17
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15555..16697
DNA (1143bp) protein (381aa)
hemolysin D n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003657B5F
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KGQ18989.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
RND family efflux transporter MFP subunit
scnpilot_solids1_trim150_scaffold_1612_curated_18
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16694..20191
DNA (3498bp) protein (1166aa)
Acriflavin resistance protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSK9_PSEUU
Acriflavin resistance protein {ECO:0000313|EMBL:ADV27223.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
scnpilot_solids1_trim150_scaffold_1612_curated_19
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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20196..22868
DNA (2673bp) protein (891aa)
acriflavin resistance protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F27A7C
Acriflavin resistance protein {ECO:0000313|EMBL:ADV27224.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
acriflavin resistance protein
Displaying 19 items

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