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scnpilot_solids1_trim150_scaffold_964_curated_3

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 1251..1709

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 144.0
  • Bit_score: 248
  • Evalue 4.40e-63
rnhA; ribonuclease H (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4] similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 147.0
  • Bit_score: 237
  • Evalue 2.30e-60
ribonuclease H n=1 Tax=Xanthomonas sacchari RepID=UPI000262AA75 similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 140.0
  • Bit_score: 246
  • Evalue 1.60e-62

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Taxonomy

Lysobacter defluvii → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
GTGAGTCCTGCACGCAAGCACGTGGATATCCATACCGACGGCGCCTGCCTGGGCAATCCCGGGCCGGGCGGCTGGGCCGCGCTGCTGTGCTGGCGGGGCGTCGAGCGCGAGCTGTCGGGGGGCGAGCCGGCCACCACCAACAACCGGATGGAGCTGATGGCGGCGATCGCCGCGCTGGAGACCCTGAAGGAGCCGTGCAACGTGGTGCTGACCACCGATTCGCAGTACGTCCGCCAAGGCATCACCGAGTGGATGGCCGGCTGGATCCGGCGCGGCTGGAAAACCTCCGGCGGCGAGGCGGTCAAGAACCGCGACCTGTGGGAACGCCTGCATGCCGCCGCCGGCCGGCACACAGTCGACTGGCGCTGGGTCAAGGGGCACGCCGGGCATCCCGAGAATGAGCGGGTCGATCAGCTGGCACGTTTGCAGGCGCTCAAGCACAAGGAGTACACGGGCTGA
PROTEIN sequence
Length: 153
VSPARKHVDIHTDGACLGNPGPGGWAALLCWRGVERELSGGEPATTNNRMELMAAIAALETLKEPCNVVLTTDSQYVRQGITEWMAGWIRRGWKTSGGEAVKNRDLWERLHAAAGRHTVDWRWVKGHAGHPENERVDQLARLQALKHKEYTG*