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scnpilot_solids1_trim150_scaffold_964_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_964_curated_1
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..590)
DNA (588bp) protein (196aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
gloB; hydroxyacylglutathione hydrolase (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6]
Hydroxyacylglutathione hydrolase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T1J9_XANCT
scnpilot_solids1_trim150_scaffold_964_curated_2
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

655..1254
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GWI7_XANCT
Uncharacterized protein {ECO:0000313|EMBL:KGQ18978.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_964_curated_3
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1251..1709
DNA (459bp) protein (153aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
rnhA; ribonuclease H (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4]
ribonuclease H n=1 Tax=Xanthomonas sacchari RepID=UPI000262AA75
scnpilot_solids1_trim150_scaffold_964_curated_4
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1709..2437
DNA (729bp) protein (243aa)
dnaQ; DNA polymerase III subunit epsilon; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III subunit epsilon n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EAE61D
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KGM52446.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
scnpilot_solids1_trim150_scaffold_964_curated_5
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2489..3220)
DNA (732bp) protein (244aa)
Protein phosphatase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GWK4_XANCT
Protein phosphatase {ECO:0000313|EMBL:KGQ18975.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
protein phosphatase
scnpilot_solids1_trim150_scaffold_964_curated_6
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3639..4046
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262AA79
DUF4254 domain containing protein {ECO:0000313|EMBL:KGQ18974.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_964_curated_7
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4051..5103)
DNA (1053bp) protein (351aa)
glycosyl transferase family protein; K12982 heptosyltransferase I [EC:2.4.-.-]
ADP-heptose--LPS heptosyltransferase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002ECBCE3
ADP-heptose--LPS heptosyltransferase {ECO:0000313|EMBL:KGM55482.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
scnpilot_solids1_trim150_scaffold_964_curated_8
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5125..5868
DNA (744bp) protein (248aa)
3-deoxy-D-manno-octulosonic acid kinase {ECO:0000256|HAMAP-Rule:MF_00521}; Short=Kdo kinase {ECO:0000256|HAMAP-Rule:MF_00521};; EC=2.7.1.166 {ECO:0000256|HAMAP-Rule:MF_00521};; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
3-deoxy-D-manno-octulosonic-acid kinase; K11211 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
3-deoxy-D-manno-octulosonic acid kinase n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3F2D5_STEMA
scnpilot_solids1_trim150_scaffold_964_curated_9
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6327..8072
DNA (1746bp) protein (582aa)
DNAX; DNA polymerase III subunits tau/gamma (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
DNA polymerase III subunits gamma and tau n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GWK2_XANCT
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:KGQ18965.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
scnpilot_solids1_trim150_scaffold_964_curated_10
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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8105..8425
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030F519F
hypothetical protein; K09747 hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_964_curated_11
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8553..9149
DNA (597bp) protein (199aa)
Recombination protein RecR n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KKE3_STEMA
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
recR; Recombination protein RecR; K06187 recombination protein RecR
scnpilot_solids1_trim150_scaffold_964_curated_12
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9233..9586
DNA (354bp) protein (118aa)
histidine triad (HIT) protein n=1 Tax=Xanthomonas arboricola RepID=UPI000373D8DB
histidine triad-like protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_964_curated_13
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9675..12557
DNA (2883bp) protein (961aa)
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000374CAEA
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EGK71511.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
diguanylate cyclase/phosphodiesterase
scnpilot_solids1_trim150_scaffold_964_curated_14
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12570..14522)
DNA (1953bp) protein (651aa)
membrane protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262B135
Membrane protein {ECO:0000313|EMBL:KGM55489.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
transglutaminase
scnpilot_solids1_trim150_scaffold_964_curated_15
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14515..15450)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TPG4_STEMA
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_964_curated_16
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15488..16450)
DNA (963bp) protein (321aa)
moxr-like ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-]
Moxr-like ATPase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UQH6_PSEUP
Moxr-like ATPase {ECO:0000313|EMBL:AER56979.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_964_curated_17
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16494..18317
DNA (1824bp) protein (608aa)
membrane protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00036E5616
Membrane protein {ECO:0000313|EMBL:EYR66602.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
Displaying 17 items

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