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scnpilot_solids1_trim150_scaffold_1644_curated_6

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(5414..6106)

Top 3 Functional Annotations

Value Algorithm Source
Rhomboid family protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UW59_PSEUP similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 231.0
  • Bit_score: 323
  • Evalue 1.50e-85
Membrane protein {ECO:0000313|EMBL:AKC88298.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 230.0
  • Bit_score: 329
  • Evalue 5.00e-87
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 231.0
  • Bit_score: 323
  • Evalue 4.80e-86

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGTTCGTCGGCATCCGCACCCGCCAGCACCGCCTGATCCTCTGGGCAACCCCGCTGCTGTTCGCCATCCTGTGGCTCAGCTACGTGGTGGCGGCCCTGCGCGCGCCGCCCGGCAGCATCGCCACCGCGCTGGACTGGGGCGTGCTGACCGGCGGACTGGACAGCGTGGAGGCATGGCGGCGGGCATTGGCCGACGGCAGCGTGCTGCGGCTGTTCTCCGGCCTGTTCCTGCATGCGGACTGGATCCACCTGCTGGGCAACCTGGTGTTCCTGCTGATCTTCGGGTTGCCGGCCGAACGCACCATGGGGGGCTGGCGCCTGCTGCTGCTGTTCCTGCTGGGCGGGGCGTTCTCCAACCTCGCCGCGGTCCTCGCGATCGGCGCGCCGGACCGGGTGGTGATCGGCGCCAGCGGCGCGGTGTCATCGCTGATCGGCGCCTATCTGGCGCTGTTCCCGGGCGCGCGCCTGGGCGTGGTGCTGCCGCTGGGGCTGTTCCTGCAGTTCGTGCGGGTGCCGGCGTTCCTGCTGATCGGCATGTGGGCCCTGCTGCAGCTCGGCTTCGCCTACAGCGGGCCGGCGTTCGGCGCGGTGGCCTGGCCGGCGCATGTAGGCGGCTTCGTCTTCGGCGTGCTGTTCGCCCTGCTCACCCGCGCCGCCATCGCGCGCCGGCTGCGCCGCAGCCGCGGCTACTAG
PROTEIN sequence
Length: 231
MFVGIRTRQHRLILWATPLLFAILWLSYVVAALRAPPGSIATALDWGVLTGGLDSVEAWRRALADGSVLRLFSGLFLHADWIHLLGNLVFLLIFGLPAERTMGGWRLLLLFLLGGAFSNLAAVLAIGAPDRVVIGASGAVSSLIGAYLALFPGARLGVVLPLGLFLQFVRVPAFLLIGMWALLQLGFAYSGPAFGAVAWPAHVGGFVFGVLFALLTRAAIARRLRRSRGY*