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scnpilot_solids1_trim150_scaffold_1644_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1644_curated_1
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..299)
DNA (297bp) protein (99aa)
Peptidase M28 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WX77_PSEUU
Uncharacterized protein {ECO:0000313|EMBL:KFN49841.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
peptidase M28
scnpilot_solids1_trim150_scaffold_1644_curated_2
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(364..1017)
DNA (654bp) protein (218aa)
Putative exported protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZF48_XANCT
Putative exported protein {ECO:0000313|EMBL:KGQ18301.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1644_curated_3
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1173..2732
DNA (1560bp) protein (520aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobac
phosphoglyceromutase; K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UW63_PSEUP
scnpilot_solids1_trim150_scaffold_1644_curated_4
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2732..3937
DNA (1206bp) protein (402aa)
peptidase M23 n=1 Tax=Xanthomonas sacchari RepID=UPI000262B026
Peptidase M23 {ECO:0000313|EMBL:KGQ18303.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
peptidase
scnpilot_solids1_trim150_scaffold_1644_curated_5
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4040..5392
DNA (1353bp) protein (451aa)
periplasmic carboxyl-terminal protease precursor signal peptide protein; K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
peptidase S41 n=1 Tax=Xanthomonas sacchari RepID=UPI000262B025
Putative periplasmic carboxyl-terminal protease signal peptide protein {ECO:0000313|EMBL:CBA14928.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
scnpilot_solids1_trim150_scaffold_1644_curated_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5414..6106)
DNA (693bp) protein (231aa)
Rhomboid family protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UW59_PSEUP
Membrane protein {ECO:0000313|EMBL:AKC88298.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
rhomboid family protein
scnpilot_solids1_trim150_scaffold_1644_curated_7
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6287..7666
DNA (1380bp) protein (460aa)
membrane protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E06797
NODE_56, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97336.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
aromatic hydrocarbon degradation membrane protein; K06076 long-chain fatty acid transport protein
scnpilot_solids1_trim150_scaffold_1644_curated_8
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7811..11026)
DNA (3216bp) protein (1072aa)
Pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:EYR66461.1}; EC=1.2.1.88 {ECO:0000313|EMBL:EYR66461.1};; EC=1.5.99.8 {ECO:0000313|EMBL:EYR66461.1};; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
putA; bifunctional protein puta [includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate] (EC:1.5.99.8 1.5.1.12); K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12]
Probable bifunctional protein puta [includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate] n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UBE4_XANAP
scnpilot_solids1_trim150_scaffold_1644_curated_9
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11303..12265
DNA (963bp) protein (321aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit 2 n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JUI9_STEMA
scnpilot_solids1_trim150_scaffold_1644_curated_10
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12295..12966
DNA (672bp) protein (224aa)
Cytochrome c oxidase, subunit I n=1 Tax=Xanthomonas citri pv. mangiferaeindicae LMG 941 RepID=H8FDJ8_XANCI
Cytochrome oxidase subunit I {ECO:0000313|EMBL:EYR66459.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
cytochrome C oxidase subunit I
Displaying 10 items

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