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scnpilot_solids1_trim150_scaffold_2255_curated_3

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: 2559..3878

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WWB3_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 424.0
  • Bit_score: 569
  • Evalue 2.30e-159
ABC transporter permease {ECO:0000313|EMBL:AKC87190.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 423.0
  • Bit_score: 579
  • Evalue 5.30e-162
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 424.0
  • Bit_score: 569
  • Evalue 7.30e-160

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGGACCCTTCTTCCACCGACGCCCGCATGGACAACCACCGCCGCATCCGCGACACCTCCGGCCAGGACCAGGTCATGGCCACGCCCTACCGCCCCGCCCGTCGCAGGCGGATCGCCATTGCCGCGACCAGCGCCGCGGTGGTGCTGGCGCTGGGCGGCTGGGTGGCCTCCGGCTGGCTGTCGGGCGACCGTTCGTTCGACGCCTCGCGCCTGCGCATCGCCAGCGTCACCCGCGGCGACCTGGTGCGCGACCTCAGCGCCGAAGGCCGGGTGATCGCGACCAACAGCCCGACCCTGTACGCGATCGCCGCCGGCACCGTGGCGCTGAAGATCGTCGCCGGCGACAAGGTGGCGAAGGGCCAGCCGCTGGCGGTGATCGACAGTCCCGAGCTGCGCAGCAGGCTGGTGCAGGAGGAATCCACCCTCGCCAGCCTGGAGGCCGAAGCAAGCCGCGCCGTGCTGGATGCGCAGATCGCGCGCGCCAACGCGCAGCGCGCACTGGACCAGGCCAGCGTCGACCGCACCGCGGCGATGCGCGATCTGGAGCGCTACCAGCGCGCCTATGAAGGCGGCGCGGTGCCGCAGAACGATCTGGCGCGCGCGCAGGACCTGATGAAGAAGGCCGACATCGGCCTGTCCGCAGCGCGCAAGGACTTCTCGCTGCAGAGCAGCGGCGCCGGGCTGGATGCGCGCAACAAGCAGTTGCAGGCGCAGCGCCAGCGCGCGGTGGTGGAGGAAGCCCGCCGGCAAGTGGATGCACTGACCCTGCGCGCGCCGTTCGATGGCCAGGTCGGGCAGGTGCAGGTGCCGCAGGGCACCCAGGTCGCCACCAACGGGCCGGTGCTCAGCGTGGTGGACCTCAGCCGCTTCGAGGTCGAGATCAAGGTGCCGGAGAGCTTCGCGCGTGACCTGGGCATCGGCATGCCGGCGCAGATCAGCGCCAACAACACCCGCTACGCCGGCGAGATCGCCGCCGTCTCGCCCGAGGTGGTGAACGGCGAGGTCACCGCCCGCGTGCGCTTCGCCGAAGGCAAGCAGCCCCCGGGCCTGCGCCAGAACCAGCGGCTGAGCGTGCGGATCGTGATGGACACCCGCCGCGACGTGCTGATGGTGGAGCGCGGCCCGTTCCTGGAACAGGACGGCGGCAACCTCGCCTGGGTGGTGGATGGCAGCAGCGCGACGCGCCGCCCGATCCGCACCGGGGCGTCCAGCCTCTCGTCCGTGGAAATCGTCTCGGGCCTGAAGGTCGGCGACCGCATCGTCGTCTCCGGCACCGATCAGTTCGGCACCGCCGAGCGCGTCCGCATCTCCGGCAACTGA
PROTEIN sequence
Length: 440
MDPSSTDARMDNHRRIRDTSGQDQVMATPYRPARRRRIAIAATSAAVVLALGGWVASGWLSGDRSFDASRLRIASVTRGDLVRDLSAEGRVIATNSPTLYAIAAGTVALKIVAGDKVAKGQPLAVIDSPELRSRLVQEESTLASLEAEASRAVLDAQIARANAQRALDQASVDRTAAMRDLERYQRAYEGGAVPQNDLARAQDLMKKADIGLSAARKDFSLQSSGAGLDARNKQLQAQRQRAVVEEARRQVDALTLRAPFDGQVGQVQVPQGTQVATNGPVLSVVDLSRFEVEIKVPESFARDLGIGMPAQISANNTRYAGEIAAVSPEVVNGEVTARVRFAEGKQPPGLRQNQRLSVRIVMDTRRDVLMVERGPFLEQDGGNLAWVVDGSSATRRPIRTGASSLSSVEIVSGLKVGDRIVVSGTDQFGTAERVRISGN*