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scnpilot_solids1_trim150_scaffold_2255_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2255_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..256)
DNA (255bp) protein (85aa)
thymidine phosphorylase (EC:2.4.2.4)
Thymidine phosphorylase {ECO:0000313|EMBL:AGG89986.1}; EC=2.4.2.4 {ECO:0000313|EMBL:AGG89986.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Thymidine phosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NQY8_9GAMM
scnpilot_solids1_trim150_scaffold_2255_curated_2
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(566..2398)
DNA (1833bp) protein (611aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1300345 species="Bact
glucosamine--fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZAL1_XANCT
scnpilot_solids1_trim150_scaffold_2255_curated_3
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2559..3878
DNA (1320bp) protein (440aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WWB3_PSEUU
ABC transporter permease {ECO:0000313|EMBL:AKC87190.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein
scnpilot_solids1_trim150_scaffold_2255_curated_4
unknown

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3896..4105
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2255_curated_5
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4134..4850
DNA (717bp) protein (239aa)
ABC transporter ATP-binding protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZAK1_XANCT
Lipoprotein releasing system ATP-binding protein LolD {ECO:0000313|EMBL:KGQ18171.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_2255_curated_6
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4861..6165
DNA (1305bp) protein (435aa)
ABC transporter ATP-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E617C7
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AJC46048.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein; K02004 putative ABC transport system permease protein
scnpilot_solids1_trim150_scaffold_2255_curated_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6578..7432
DNA (855bp) protein (285aa)
ABC transporter permease n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UVB6_PSEUP
ABC transporter permease {ECO:0000313|EMBL:AHY57612.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
ABC transporter permease; K02004 putative ABC transport system permease protein
scnpilot_solids1_trim150_scaffold_2255_curated_8
unknown

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7460..7618
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2255_curated_9
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7700..7948
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B30C25
Uncharacterized protein {ECO:0000313|EMBL:KFN41032.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2255_curated_10
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7980..8957
DNA (978bp) protein (326aa)
histidine kinase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E1A897
Histidine kinase {ECO:0000313|EMBL:KGQ18168.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
Fis family transcriptional regulator
Displaying 10 items

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