ggKbase home page

scnpilot_solids2_trim150_scaffold_230_curated

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_230_curated_1
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..778)
DNA (777bp) protein (259aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJV8_NAKMY
scnpilot_solids2_trim150_scaffold_230_curated_2
unknown

Not on your lists

comp(858..1181)
DNA (324bp) protein (108aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_230_curated_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1298..2251
DNA (954bp) protein (318aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
DNA-(Apurinic or apyrimidinic site) lyase {ECO:0000313|EMBL:ACV76643.1}; EC=4.2.99.18 {ECO:0000313|EMBL:ACV76643.1};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
DNA-(Apurinic or apyrimidinic site) lyase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJW0_NAKMY
scnpilot_solids2_trim150_scaffold_230_curated_4
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2289..4061)
DNA (1773bp) protein (591aa)
HNH nuclease n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1UUD2_9MICC
HNH nuclease {ECO:0000313|EMBL:EMY34036.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
HNH nuclease
scnpilot_solids2_trim150_scaffold_230_curated_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4213..4542
DNA (330bp) protein (110aa)
Rhodanese domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJW3_NAKMY
rhodanese domain-containing protein
Rhodanese domain protein {ECO:0000313|EMBL:ACV76646.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_230_curated_6
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4865..5761
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJW4_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV76647.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_230_curated_7
unknown

Not on your lists

comp(5720..6382)
DNA (663bp) protein (221aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_230_curated_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7003..7959
DNA (957bp) protein (319aa)
SEC-C motif domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJW5_NAKMY
SEC-C motif domain-containing protein
SEC-C motif domain protein {ECO:0000313|EMBL:ACV76648.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_230_curated_9
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7990..9048
DNA (1059bp) protein (353aa)
Glycerate kinase {ECO:0000313|EMBL:CCM62978.1}; EC=2.7.1.31 {ECO:0000313|EMBL:CCM62978.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
glycerate kinase (EC:2.7.1.31)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI00035E17D5
scnpilot_solids2_trim150_scaffold_230_curated_10
Mycobacterium parascrofulaceum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9038..9694)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037D783F
Nitroreductase family protein {ECO:0000313|EMBL:EFG79225.1}; TaxID=525368 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium parascrofulaceum ATCC BAA-614.;"
nitroreductase
scnpilot_solids2_trim150_scaffold_230_curated_11
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9784..11907
DNA (2124bp) protein (708aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037B281C
Peptidase S9 {ECO:0000313|EMBL:KGM03727.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
peptidase S9 prolyl oligopeptidase active site domain protein
scnpilot_solids2_trim150_scaffold_230_curated_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12051..12896)
DNA (846bp) protein (282aa)
Abortive infection protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJW6_NAKMY
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:ACV76649.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_230_curated_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13069..14442
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJW7_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV76650.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_230_curated_14
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14585..15442)
DNA (858bp) protein (286aa)
Membrane protein-like protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XGR6_NAKMY
hypothetical protein
Membrane protein-like protein {ECO:0000313|EMBL:ACV78249.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_230_curated_15
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15444..16481)
DNA (1038bp) protein (346aa)
Permease n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XGR5_NAKMY
permease; K07089
Permease {ECO:0000313|EMBL:ACV78248.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_230_curated_16
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16596..17543
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000367ACDB
ChaT2 protein {ECO:0000313|EMBL:CCH80318.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
periplasmic solute binding protein; K02077 zinc/manganese transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_230_curated_17
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17566..18531)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000381D95E
ABC transporter permease {ECO:0000313|EMBL:EWT07930.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
peptide transport system permease protein
scnpilot_solids2_trim150_scaffold_230_curated_18
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18542..19498)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000374DE81
ABC transporter permease {ECO:0000313|EMBL:EWT07931.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
appC; oligopeptide transport system permease AppC
scnpilot_solids2_trim150_scaffold_230_curated_19
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19498..20553)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI000373BDB2
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWT07932.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
putative peptide ABC transporter ATP-binding protein
scnpilot_solids2_trim150_scaffold_230_curated_20
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20550..21575)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00035D1DDC
Peptide ABC transporter ATPase {ECO:0000313|EMBL:EWT07933.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
oligopeptide/dipeptide ABC transporter ATPase subunit; K02031 peptide/nickel transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_230_curated_21
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21590..23572)
DNA (1983bp) protein (661aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036DE18A
extracellular solute-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EWT07934.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
scnpilot_solids2_trim150_scaffold_230_curated_22
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23861..24859)
DNA (999bp) protein (333aa)
1-phosphofructokinase (EC:2.7.1.56); K00882 1-phosphofructokinase [EC:2.7.1.56]
phosphofructokinase n=1 Tax=Amycolatopsis methanolica RepID=UPI000369E331
1-phosphofructokinase {ECO:0000313|EMBL:AIJ24956.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
scnpilot_solids2_trim150_scaffold_230_curated_23
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24938..25900
DNA (963bp) protein (321aa)
prephenate dehydratase (EC:4.2.1.51); K04518 prephenate dehydratase [EC:4.2.1.51]
Prephenate dehydratase {ECO:0000256|RuleBase:RU361254}; Short=PDT {ECO:0000256|RuleBase:RU361254};; EC=4.2.1.51 {ECO:0000256|RuleBase:RU361254};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Prephenate dehydratase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJW8_NAKMY
scnpilot_solids2_trim150_scaffold_230_curated_24
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25903..26586
DNA (684bp) protein (228aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Putative phosphoglycerate mutase n=1 Tax=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) RepID=B1VQ60_STRGG
Histidine phosphatase {ECO:0000313|EMBL:KJC64000.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
scnpilot_solids2_trim150_scaffold_230_curated_25
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26625..27287
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJX0_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV76653.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_230_curated_26
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27307..27705)
DNA (399bp) protein (133aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WED7_KINRD
F420-dependent oxidoreductase {ECO:0000313|EMBL:KGM02566.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
scnpilot_solids2_trim150_scaffold_230_curated_27
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27730..28707)
DNA (978bp) protein (326aa)
PfkB domain-containing protein; K00847 fructokinase [EC:2.7.1.4]
PfkB domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJX3_NAKMY
PfkB domain protein {ECO:0000313|EMBL:ACV76656.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_230_curated_28
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28735..28827)
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJX8_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV76661.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_230_curated_29
unknown

Not on your lists

comp(28938..29285)
DNA (348bp) protein (116aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_230_curated_30
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29381..30646
DNA (1266bp) protein (422aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Serine--tRNA ligase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJX9_NAKMY
Displaying items 1-30 of 62 in total

View Taxonomy