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scnpilot_solids2_trim150_scaffold_942_curated

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_942_curated_1
unknown

Not on your lists

comp(70..747)
DNA (678bp) protein (226aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_942_curated_2
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1057..1680)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6ESF6_AMYSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF43077.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
scnpilot_solids2_trim150_scaffold_942_curated_3
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1674..2252)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6ESF5_AMYSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF43076.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
scnpilot_solids2_trim150_scaffold_942_curated_4
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2402..3652)
DNA (1251bp) protein (417aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7]
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037C1749
scnpilot_solids2_trim150_scaffold_942_curated_5
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3742..7044
DNA (3303bp) protein (1101aa)
ATP-dependent nuclease subunit B-like protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PY24_KRIFD
ATP-dependent nuclease subunit B-like protein
ATP-dependent nuclease subunit B-like protein {ECO:0000313|EMBL:ADB33630.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
scnpilot_solids2_trim150_scaffold_942_curated_6
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7041..10457
DNA (3417bp) protein (1139aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
UvrD/REP helicase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C3C8_BEUC1
UvrD/REP helicase
scnpilot_solids2_trim150_scaffold_942_curated_7
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10830..12026
DNA (1197bp) protein (399aa)
ROK family transcriptional regulator n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P692_LEIXC
ROK family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AGW41835.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
scnpilot_solids2_trim150_scaffold_942_curated_8
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12023..13408
DNA (1386bp) protein (462aa)
Oxidoreductase domain protein n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WA08_KINRD
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABS03647.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
scnpilot_solids2_trim150_scaffold_942_curated_9
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13401..14837
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI00036453CF
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYT66164.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_942_curated_10
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14842..15843
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI00037EF190
Sugar ABC transporter permease {ECO:0000313|EMBL:EYT66165.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein
scnpilot_solids2_trim150_scaffold_942_curated_11
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15855..16721
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI000360F07A
Sugar ABC transporter permease {ECO:0000313|EMBL:EYT66166.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
ABC transporter inner membrane protein; K02026 multiple sugar transport system permease protein
scnpilot_solids2_trim150_scaffold_942_curated_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16904..17413
DNA (510bp) protein (170aa)
SNARE associated Golgi protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X884_NAKMY
hypothetical protein
SNARE associated Golgi protein {ECO:0000313|EMBL:ACV77060.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_942_curated_13
Rhodococcus rhodnii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17334..20030)
DNA (2697bp) protein (899aa)
Uncharacterized protein n=1 Tax=Rhodococcus rhodnii LMG 5362 RepID=R7WIL7_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EOM75046.1}; TaxID=1273125 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodnii LMG 5362.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_942_curated_14
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20367..22805)
DNA (2439bp) protein (813aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Superfamily I DNA and RNA helicase-like protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XIV5_NAKMY
superfamily I DNA and RNA helicase-like protein
scnpilot_solids2_trim150_scaffold_942_curated_15
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22896..24374)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E4M0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CCH79351.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
HNH endonuclease
scnpilot_solids2_trim150_scaffold_942_curated_16
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24673..24762
DNA (90bp) protein (30aa)
multicopper oxidase, type 3; K00368 nitrite reductase (NO-forming) [EC:1.7.2.1]
Multicopper oxidase, type 3 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SIH5_NOCSJ
Multicopper oxidase, type 3 {ECO:0000313|EMBL:ABL81610.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
Displaying 16 items

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