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scnpilot_solids2_trim150_scaffold_1356_curated_9

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(8295..8777)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKP8_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 161.0
  • Bit_score: 263
  • Evalue 1.70e-67
transcription elongation factor GreA; K03624 transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 161.0
  • Bit_score: 263
  • Evalue 5.30e-68
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 161.0
  • Bit_score: 263
  • Evalue 2.40e-67

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGACCGCAGCGAGTGAGACCTGGCTGACTCAGGACGCCTACGACCGGCTGAAGGCGGAACTCGACGAGCTGGTGGTGAACCGCCCGGTGCTGGCGGCCGAGATCAACGCACGCCGCGAAGAGGGCGATCTGAAGGAGAACGGCGGCTACCACGCGGCCCGCGACGAGCAGGGCAAGCAGGAGGCGCGGATCCGGCAGCTGCAGGAGCTGCTGCGCACCGCGCAGGTGGGAGTGCGCGCCGCCGACGACGGCATCGTCGAGCCGGGCATGGTCGTCACGATCGCCTACGACGGTGACGACGATCAGGAGACGTTCCTGGTGGGCTCCCGCGAAGAGGGCGCCCACGGGTCGATGAAGGTGTACTCGCCGCAGTCGCCGCTCGGCAAGGCGATCCTGGGCGCTGCCCGCGGCGAGGCCCGGGAGTACGAACTGCCCAGCGGCAAGACCCAGAAGGTCACCATCATCGACACCAAGCCGTTCTGA
PROTEIN sequence
Length: 161
MTAASETWLTQDAYDRLKAELDELVVNRPVLAAEINARREEGDLKENGGYHAARDEQGKQEARIRQLQELLRTAQVGVRAADDGIVEPGMVVTIAYDGDDDQETFLVGSREEGAHGSMKVYSPQSPLGKAILGAARGEAREYELPSGKTQKVTIIDTKPF*