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scnpilot_solids2_trim150_scaffold_1356_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1356_curated_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..589)
DNA (588bp) protein (196aa)
Lipolytic protein G-D-S-L family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKQ3_NAKMY
G-D-S-L family lipolytic protein
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:ACV80710.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1356_curated_2
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

653..2017
DNA (1365bp) protein (455aa)
cystathionine beta-synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22]
Cystathionine beta-synthase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKQ2_NAKMY
Cystathionine beta-synthase {ECO:0000313|EMBL:ACV80709.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1356_curated_3
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(2087..2692)
DNA (606bp) protein (202aa)
Hydrolase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RCI9_9ACTO
Hydrolase {ECO:0000313|EMBL:EEP69842.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
hydroxyacylglutathione hydrolase
scnpilot_solids2_trim150_scaffold_1356_curated_4
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2689..3792)
DNA (1104bp) protein (368aa)
NAD/mycothiol-dependent formaldehyde dehydrogenase; K00153 S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
NAD/mycothiol-dependent formaldehyde dehydrogenase {ECO:0000313|EMBL:BAK33315.1}; EC=1.1.1.306 {ECO:0000313|EMBL:BAK33315.1};; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
NAD/mycothiol-dependent formaldehyde dehydrogenase n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XIY9_MICPN
scnpilot_solids2_trim150_scaffold_1356_curated_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3966..4445
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKQ1_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV80708.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1356_curated_6
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4557..5702
DNA (1146bp) protein (382aa)
cystathionine gamma-synthase (EC:2.5.1.48); K01739 cystathionine gamma-synthase [EC:2.5.1.48]
Cystathionine gamma-synthase {ECO:0000313|EMBL:ACV80707.1}; EC=2.5.1.48 {ECO:0000313|EMBL:ACV80707.1};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Cystathionine gamma-synthase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKQ0_NAKMY
scnpilot_solids2_trim150_scaffold_1356_curated_7
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5819..6769
DNA (951bp) protein (317aa)
ROK family protein; K00845 glucokinase [EC:2.7.1.2]
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00037C830B
ROK family protein {ECO:0000313|EMBL:ACY96642.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
scnpilot_solids2_trim150_scaffold_1356_curated_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6951..8162
DNA (1212bp) protein (404aa)
threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19]
Threonine dehydratase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKP9_NAKMY
Threonine dehydratase {ECO:0000313|EMBL:ACV80706.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1356_curated_9
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8295..8777)
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKP8_NAKMY
transcription elongation factor GreA; K03624 transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1356_curated_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9258..10277
DNA (1020bp) protein (340aa)
Mycothiol S-conjugate amidase {ECO:0000256|HAMAP-Rule:MF_01482}; EC=3.5.1.115 {ECO:0000256|HAMAP-Rule:MF_01482};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Mycothiol S-conjugate amidase Mca n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKP7_NAKMY
mycothiol conjugate amidase Mca
scnpilot_solids2_trim150_scaffold_1356_curated_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10274..10720
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKP6_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV80703.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_1356_curated_12
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10736..11548)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI00037E780D
Side tail fiber protein {ECO:0000313|EMBL:KGM03696.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
Siderophore-interacting protein
scnpilot_solids2_trim150_scaffold_1356_curated_13
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11612..12046)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI0003700FFC
putative signal transduction protein with CBS domains
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:ACY97813.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
scnpilot_solids2_trim150_scaffold_1356_curated_14
unknown

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comp(12218..13075)
DNA (858bp) protein (286aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1356_curated_15
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13104..14024)
DNA (921bp) protein (307aa)
Cell wall surface anchor protein n=1 Tax=Streptococcus mitis SPAR10 RepID=J1S8E1_STRMT
Cell wall surface anchor protein {ECO:0000313|EMBL:EJG85970.1}; TaxID=1159208 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis SPAR10.;"
similar to LOC594926 protein
scnpilot_solids2_trim150_scaffold_1356_curated_16
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14238..14798
DNA (561bp) protein (187aa)
Palmitoyl-CoA hydrolase {ECO:0000313|EMBL:AIY17520.1}; EC=3.1.2.2 {ECO:0000313|EMBL:AIY17520.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003605EFE
BAAT/Acyl-CoA thioester hydrolase
scnpilot_solids2_trim150_scaffold_1356_curated_17
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15006..15674)
DNA (669bp) protein (223aa)
TetR family transcriptional regulator n=3 Tax=Amycolatopsis mediterranei RepID=D8HU11_AMYMU
TetR family transcriptional regulator {ECO:0000313|EMBL:KGM00746.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1356_curated_18
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15794..16111
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000373E1C0
Uncharacterized protein {ECO:0000313|EMBL:EMQ97001.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
scnpilot_solids2_trim150_scaffold_1356_curated_19
unknown

Not on your lists

16174..16869
DNA (696bp) protein (232aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1356_curated_20
Mycobacterium rufum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16841..17032)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036DABA8
Membrane protein {ECO:0000313|EMBL:KGI68905.1}; TaxID=318424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rufum.;"
hypothetical protein
Displaying 20 items

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