ggKbase home page

scnpilot_solids2_trim150_scaffold_1034_curated_10

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(9249..9923)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE76FC related cluster n=1 Tax=unknown RepID=UPI0003CE76FC similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 201.0
  • Bit_score: 155
  • Evalue 9.10e-35
Thiamine pyrophosphate-binding protein {ECO:0000313|EMBL:ESW94150.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 201.0
  • Bit_score: 155
  • Evalue 1.30e-34
thiamine pyrophosphate-requiring enzyme similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 201.0
  • Bit_score: 148
  • Evalue 2.00e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LSJC280B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGTCACCTACGCCAGACATGGATCGTATTGACGCGATAACATCGATCGCAAGTGTGGTGTCTGAGGACGACCTATTCATTAGCTCGCTCGGGGCTCTTCGAGCCGACTGGTGGAATCATCGGCCGGGTGGGCCGAATGGCCCTGATTTGTGTTTTTGGCCGGTGGCACTCGGTTCTGTGACGCCCATGGCGTTGGGGCTCGCGCTTGCCCTGCCGCACAGGTCGGTCTATGCACTCGAGACCGACGGGTCGGTCCTGATGAACACAGGCGTCTTCTGCACGCTGGCGCGCCAGAAACCCAAGAACCTGACGATAATTATCTTTGACAACGAGATGTACGAGAGCATTGGTGGGATCCCATCACTGACCGCGTTCGGTTGCGACTTGTCCAAGATGGCCTCGGGCGCGGGTTGCGAAAACTGCGAGACAGTGTGGGATGCGCCGAGCTTGAAGGACTGCGTTGATAGGTTTGGCCACGATGATGCCTTTGGGCTTGTCACCGCAAAGGTTTCATCTGCGGTCTATCCTTGGCCGAATGAGAAGCGTAAGCCGACGGATGGTGTCGAAGACAAGTACCGCTTCATGAGGCACGTGGAGGCGAGTGAAGGTCGGGTCGTGCATCGCGTCGAGACGATAGAGCATCGCGCGCCAGCCCAGCGGCCTAGCGCGGTGTGA
PROTEIN sequence
Length: 225
MSPTPDMDRIDAITSIASVVSEDDLFISSLGALRADWWNHRPGGPNGPDLCFWPVALGSVTPMALGLALALPHRSVYALETDGSVLMNTGVFCTLARQKPKNLTIIIFDNEMYESIGGIPSLTAFGCDLSKMASGAGCENCETVWDAPSLKDCVDRFGHDDAFGLVTAKVSSAVYPWPNEKRKPTDGVEDKYRFMRHVEASEGRVVHRVETIEHRAPAQRPSAV*