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scnpilot_solids2_trim150_scaffold_554_curated_4

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(2386..4566)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627187 similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 677.0
  • Bit_score: 904
  • Evalue 8.50e-260
Drug exporter of the RND superfamily {ECO:0000313|EMBL:AIJ21581.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 677.0
  • Bit_score: 902
  • Evalue 3.50e-259
putative drug exporter of the RND superfamily; K06994 putative drug exporter of the RND superfamily similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 683.0
  • Bit_score: 884
  • Evalue 1.70e-254

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2181
ATGACAGATGACGTAGTCGGTGACGAAGGCGAACCGGGCAGCCACGCCCAGGAAGACTTCGGGGCAGCCCCGGAGCGGTCGCCACGGCGTCCGCGGAAGCTGCGGCTGCTGTTACCCGCACTGCTGGTGGTGGTGTGGCTGGCAGTGGGCGGTATCGGCGGTCCCTTCGCCGGCAAGCTCAGCAGCGTCGCGAGCAACGACAGCGCCTCGTTCCTGCCCTCGTCGGCGGAATCCACCCGCGTGCAGGCCGAACAACGAGCGTTCTCTACCTCGCAGGATCTGCCTGCGGTGATCATCGCCGCCCGCGACGGCGGGATCACCCCGGCGGACCGCGAGTTCCTCGCGGCCGCCCTGCACCGGATCCAGCAACTGCCGCACGTCGATGCACGCTCGGTGTCCCCTCCGATCCCGTCGAAAGACGGCAAGGCCCTGCAAGTGTTCGTCCCGATCAGCGACTCCGCCGCCGCCGGCGACACCGTCGACGCCATGCGCCACGACCTGACCGGCGCACCGGCCGGTCTGACGGTGCTGGTCACCGGGCCAGCCGGGTTGATCGCCGACCTGGTGACCGCCTTCGCCGGCATCGACGGCCTGCTGCTGCTCGTCGCAGCCGCGGTGGTCGTGCTGATCCTCGTGGTGGTCTATCGCAGCGTGCTGCTGCCGCTGATCGTGTTGCTGTCCGCGGTGTTCGCGCTCGGCCTGGCCAGCCTGGCCGTGTACGTGCTCGCCGACACGGACGTGCTGACCCTGAACGGCCAGAGCCAAGGAATCCTGTTCATCCTGGTCTTCGGCGCAGCCACCGACTACGCCCTGCTGCTGGTATCCCGATTCCGGGAACAACTCCGCGACACCCCCGACCGCGTCGCCGCGATGCGACTCGCGTGGCGGGCCACCCTCGAACCCATCGCCGCATCCGCCGGCACCGTCATCCTGGGGGTGCTGTGCCTGCTGTTCTCCGACCTGAACTCCAACCGCAGCCTAGGCCCCGTCGCCGCCATCGGGATCGCCGCCGCATTCCTGGCCTCGATGACGTTCCTGCCCGCGATCCTGGCGCTGATCGGCCGCGGCGCGTTCTGGCCGCTCCGGCCCGCCCACGGATCGCAGCATCCCGAGACCCGCGGCTGGTGGGCAGCCCTCGCGGCCCGCATCACCCACCGGCCCCGCACCGTGTGGATCGTCACCGGCATCGCACTGTTGATCTTCGCCGCCTTCCTGCCGCAGCTACGCGCGCAAGGAACGTCGCAATCCGCGACGTTCCTGCGGCCCGTCGACGCGGTCGCCGGGCAGAACCTGCTCGCCGAACACTTCCCCGGCGGCAGCGGCAACCCGACCGTGATCATCGCCAACGCCGACGCCGCACCCCAGGTCCAGGCCGCCGCGAAGATCCCCGGCGTGGCCCAGGTCAGCACGCTGGCCGGCCGGGACGGCCAACCCACAGTCGTCGACGGTAGGACCGAGATCCAGGCCGTCCTCAGCGCACCCGCGGGCTCCGAACAAGCAGTCACCACCGTCGCCAGGCTCCGGAAGGCCGTACACGCCGTGCCCGGCGCGGACGCCCTCGTCGGCGGCCAGACCGCCATCCAACTCGACACCCAACAGACCTCCGAACGCGACCGCACGGTGATCATCCCGATCGTGCTCGTCGTGATCTTCCTGATCCTCGCCCTGCTGCTGCGGGCACTGATCGCCCCCTTGGTGTTGATCGCCACCGTGGTGCTCTCCTTCGCCGCCACCATGGGAATCACCGCCCTGGTGTTCAACCACCTGTTCCACTTCCCCGGCGCCGATCCCTCCGTGCCGCTGTTCGGGTTCGTCTTTCTCGTCGCCCTCGGCATCGACTACAACATCTTCCTGATGACCAGAGTGCGCGAGGAAACCATCCGGTCCGGGACGAGGGATGGCACCCGCAGGGCGCTGGCCCTGACCGGCGGAGTGATCACTTCGGCCGGCGTCGTACTCGCCGCCACATTCGCCGCACTCGCCGTCATCCCCCTGCTCTTCCTCGCCCAGATCGCCTTCATCGTTGCGTTCGGAGTGCTACTGGACACCCTGGTGGTGCGCACCCTGCTCGTGCCCGCCGCCGTGATCGACCTCGACCGCCGCACCTGGTGGCCCTCACGCCTGATGCGCGCCGGCCACCAGCCCGGCGAGCGGGCAACGCCAGCGCGGCGAGTGTCATGA
PROTEIN sequence
Length: 727
MTDDVVGDEGEPGSHAQEDFGAAPERSPRRPRKLRLLLPALLVVVWLAVGGIGGPFAGKLSSVASNDSASFLPSSAESTRVQAEQRAFSTSQDLPAVIIAARDGGITPADREFLAAALHRIQQLPHVDARSVSPPIPSKDGKALQVFVPISDSAAAGDTVDAMRHDLTGAPAGLTVLVTGPAGLIADLVTAFAGIDGLLLLVAAAVVVLILVVVYRSVLLPLIVLLSAVFALGLASLAVYVLADTDVLTLNGQSQGILFILVFGAATDYALLLVSRFREQLRDTPDRVAAMRLAWRATLEPIAASAGTVILGVLCLLFSDLNSNRSLGPVAAIGIAAAFLASMTFLPAILALIGRGAFWPLRPAHGSQHPETRGWWAALAARITHRPRTVWIVTGIALLIFAAFLPQLRAQGTSQSATFLRPVDAVAGQNLLAEHFPGGSGNPTVIIANADAAPQVQAAAKIPGVAQVSTLAGRDGQPTVVDGRTEIQAVLSAPAGSEQAVTTVARLRKAVHAVPGADALVGGQTAIQLDTQQTSERDRTVIIPIVLVVIFLILALLLRALIAPLVLIATVVLSFAATMGITALVFNHLFHFPGADPSVPLFGFVFLVALGIDYNIFLMTRVREETIRSGTRDGTRRALALTGGVITSAGVVLAATFAALAVIPLLFLAQIAFIVAFGVLLDTLVVRTLLVPAAVIDLDRRTWWPSRLMRAGHQPGERATPARRVS*