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scnpilot_solids2_trim150_scaffold_554_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_554_curated_1
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(156..953)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2VGH7_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EME22106.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
membrane protein
scnpilot_solids2_trim150_scaffold_554_curated_2
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1166..1540
DNA (375bp) protein (125aa)
TspO and MBR-like protein n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2XHE8_9NOCA
TspO and MBR-like protein {ECO:0000313|EMBL:EME23083.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
TspO and MBR-like protein; K07185 tryptophan-rich sensory protein
scnpilot_solids2_trim150_scaffold_554_curated_3
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1631..2389)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036D42E5
Uncharacterized protein {ECO:0000313|EMBL:KHL17092.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_554_curated_4
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2386..4566)
DNA (2181bp) protein (727aa)
membrane protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627187
Drug exporter of the RND superfamily {ECO:0000313|EMBL:AIJ21581.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
putative drug exporter of the RND superfamily; K06994 putative drug exporter of the RND superfamily
scnpilot_solids2_trim150_scaffold_554_curated_5
Arthrobacter sp. IHBB 11108, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4653..5102)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000378B3AA
Uncharacterized protein {ECO:0000313|EMBL:AJT42684.1}; TaxID=1618207 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. IHBB 11108.;"
polyketide cyclase/dehydrase
scnpilot_solids2_trim150_scaffold_554_curated_6
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5163..6518)
DNA (1356bp) protein (452aa)
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:AIY16975.1}; EC=4.1.99.3 {ECO:0000313|EMBL:AIY16975.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
deoxyribodipyrimidine photo-lyase type I (EC:4.1.99.3); K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00035D4C66
scnpilot_solids2_trim150_scaffold_554_curated_7
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6662..8011
DNA (1350bp) protein (450aa)
Nucleoside-diphosphate sugar epimerase (SulA family) n=2 Tax=Saccharopolyspora erythraea RepID=A4FH41_SACEN
nucleoside-diphosphate sugar epimerase; K07071
Nucleoside-diphosphate sugar epimerase (SulA family) {ECO:0000313|EMBL:CAM03366.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
scnpilot_solids2_trim150_scaffold_554_curated_8
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8053..9336)
DNA (1284bp) protein (428aa)
cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
hypothetical protein n=1 Tax=Actinopolyspora mortivallis RepID=UPI0003704138
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:AHH97143.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
scnpilot_solids2_trim150_scaffold_554_curated_9
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9333..10211)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE521
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWC58315.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
scnpilot_solids2_trim150_scaffold_554_curated_10
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10208..11485)
DNA (1278bp) protein (426aa)
Amine oxidase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K9X5_SACES
Amine oxidase
Amine oxidase {ECO:0000313|EMBL:CCH33448.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
scnpilot_solids2_trim150_scaffold_554_curated_11
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11698..12213
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003643BBA
Predicted protein {ECO:0000313|EMBL:EFL05453.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
regulatory protein MarR
scnpilot_solids2_trim150_scaffold_554_curated_12
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12375..12809)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI000377CC3D
Uncharacterized protein {ECO:0000313|EMBL:EMR00151.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_554_curated_13
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12862..13389)
DNA (528bp) protein (176aa)
peptidase C60 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4AF60
peptidase C60 sortase A and B
Peptidase C60 sortase A and B {ECO:0000313|EMBL:CCG03559.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
scnpilot_solids2_trim150_scaffold_554_curated_14
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13996..14868)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B695C3
Uncharacterized protein {ECO:0000313|EMBL:AIY03941.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_554_curated_15
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15622..16443)
DNA (822bp) protein (274aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
kdpD; sensor histidine kinase (EC:2.7.3.-); K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
Osmosensitive K channel His kinase sensor n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YX02_9ACTN
scnpilot_solids2_trim150_scaffold_554_curated_16
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16450..16605)
DNA (156bp) protein (52aa)
potassium-transporting ATPase subunit C; K01548 K+-transporting ATPase ATPase C chain [EC:3.6.3.12]
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Potassium-transporting ATPase C chain n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AWT1_FRADG
scnpilot_solids2_trim150_scaffold_554_curated_17
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16618..17133)
DNA (516bp) protein (172aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.
potassium-transporting ATPase subunit C (EC:3.6.3.12); K01548 K+-transporting ATPase ATPase C chain [EC:3.6.3.12]
hypothetical protein n=1 Tax=Curtobacterium flaccumfaciens RepID=UPI000361F3ED
scnpilot_solids2_trim150_scaffold_554_curated_18
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17139..19274)
DNA (2136bp) protein (712aa)
K+-transporting ATPase subunit B; K01547 K+-transporting ATPase ATPase B chain [EC:3.6.3.12]
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JC
Potassium-transporting ATPase B chain n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q288_KRIFD
scnpilot_solids2_trim150_scaffold_554_curated_19
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19271..20932)
DNA (1662bp) protein (554aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
kdpA; putative high-affinity potassium transport system; K01546 K+-transporting ATPase ATPase A chain [EC:3.6.3.12]
ATPase n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00037A6F06
scnpilot_solids2_trim150_scaffold_554_curated_20
unknown

Not on your lists

comp(20929..21069)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_554_curated_21
unknown

Not on your lists

21194..21316
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_554_curated_22
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21611..22399)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XB71_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV81363.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_554_curated_23
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22396..23061)
DNA (666bp) protein (222aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XB72_NAKMY
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACV81364.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_554_curated_24
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23232..24455
DNA (1224bp) protein (408aa)
Cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:EFE82889.2}; EC=2.1.1.79 {ECO:0000313|EMBL:AGI88971.1};; TaxID=457425 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus J1074.;"
cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Streptomyces sp. LaPpAH-202 RepID=UPI000375B843
scnpilot_solids2_trim150_scaffold_554_curated_25
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24625..25689)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RN75_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG02623.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
scnpilot_solids2_trim150_scaffold_554_curated_26
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25860..26048
DNA (189bp) protein (63aa)
Phage transcriptional regulator, AlpA n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BW62_XYLCX
phage transcriptional regulator AlpA
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ACZ29565.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
scnpilot_solids2_trim150_scaffold_554_curated_27
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26284..27306
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EYP6_MODMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH88509.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
scnpilot_solids2_trim150_scaffold_554_curated_28
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27336..27563
DNA (228bp) protein (76aa)
DNA binding domain protein, excisionase family n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SF20_GEOOG
excisionase family DNA-binding domain-containing protein
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ADB74710.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
scnpilot_solids2_trim150_scaffold_554_curated_29
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27780..28871
DNA (1092bp) protein (364aa)
TraSA:integrase fusion protein n=1 Tax=Mycobacterium avium (strain 104) RepID=A0QET6_MYCA1
integrase fusion protein
Integrase {ECO:0000313|EMBL:KDP06490.1}; TaxID=1402967 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. hominissuis 101.;"
scnpilot_solids2_trim150_scaffold_554_curated_30
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29420..30739
DNA (1320bp) protein (440aa)
Arsenical pump membrane protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJC8_NAKMY
Arsenical pump membrane protein
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying items 1-30 of 33 in total

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