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scnpilot_solids2_trim150_scaffold_11_curated_3

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: 5064..6269

Top 3 Functional Annotations

Value Algorithm Source
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] similarity KEGG
DB: KEGG
  • Identity: 27.2
  • Coverage: 393.0
  • Bit_score: 138
  • Evalue 6.40e-30
Peptidase dimerization domain protein n=1 Tax=Frankia sp. EUN1f RepID=D3D228_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 390.0
  • Bit_score: 579
  • Evalue 2.70e-162
Peptidase dimerization domain protein {ECO:0000313|EMBL:EFC82996.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 390.0
  • Bit_score: 579
  • Evalue 3.70e-162

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Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGACCGACGCGATCGACGTTGCGGCGCAGAAGGCCGTATCTGCGATCAATGTGCAGCGACTGACCGAACTCGTGCAGCAGGTCTGCCGGATTCCCAGCATCCTCGGTGACGAGGGACCGCTGGCCCGATTCCTCGCCGACTACATGCGGGGCGCCGGCTTCGAGAACGCTGGATTGCAGGAGGTGCTGCCGGATCGCCCGAACGCGATTGGCGAGCTGGGTTTCGGTGACGGACAGCGGGTCGTCTTCACCGGACACATGGACACCAAACCCGTCTCGATCGGCTGGACGAGGACGGAACCGTTCTCTGGCGACATCATCGACGAGGCCATCTACGGCCACGGGATCATGGACATGAAGGCGGCGCTGGTCTGCCAGATTGTCGCCATGGAGGCGCTACGTGACGCGGGGGTGGATCTGCACGGCTCCGTCGCGATGGCGGCCGTCTCGGACCACATGGGCGATCAGCGCGGCTCGATCCGGTACTTCGACGAGTATTCGGCGGACCTGGCCGTGCTGGGCGAGCTGTCAGACAACGAAATCTTCCTGGGCCACCGGGGTCGCTACTACTTCGACATCACGGTGCAGGGCANNNNNNNNNNNNNCTGCCACAAGCCGCTCGCCATCAATGCCAATCTGCTGGCCGCGCACGCCGTGATCGAGTTCGACCGGTCGCACCTGGCGCCCGAGATCGAGCAGTGGGTGACGGAACTGTTCGGCCCTGAGACCTACATGGTGCCCGGGCGAATCTACGGCGGACTGCCCCCGGGCGGACCGTCCATGATCCCCGACGAATGCGTCATCCGCGTCGACTGCCGCCCGCAGCCGGGAGTGTCGGTTGAGACTGTCCGGGCGGAGATCGACAGGTGCCTGGCCGGGGCGCACCGGCGTGACCCCCGTTTCAAGGCGACAGTGGAACTGGCGGACGTCAAGAGCGGCTACCTGGCCAAGCCCGGCGACCGCGTCGTCGAGATCATGCGAGCGTCGGTGAAGTCCGTTCGGGACGGCGTCGAACCGGAACTGCGGGCGGCCGGGTGGCTGGGCGACACTGCCAGCTTCGGGCATCAGGTGCCGACCGTCATCTTCGGGCCGGGCGGCGAACCGGTGTACTGCCCGGATGAGCACCTCTCACTGGACGACATCGTCGAGGCCACGCAGGTCTACACACAGTTTGCGGTACGTGCCTTGGGTTCTCAGGACTCCTGA
PROTEIN sequence
Length: 402
MTDAIDVAAQKAVSAINVQRLTELVQQVCRIPSILGDEGPLARFLADYMRGAGFENAGLQEVLPDRPNAIGELGFGDGQRVVFTGHMDTKPVSIGWTRTEPFSGDIIDEAIYGHGIMDMKAALVCQIVAMEALRDAGVDLHGSVAMAAVSDHMGDQRGSIRYFDEYSADLAVLGELSDNEIFLGHRGRYYFDITVQGXXXXXCHKPLAINANLLAAHAVIEFDRSHLAPEIEQWVTELFGPETYMVPGRIYGGLPPGGPSMIPDECVIRVDCRPQPGVSVETVRAEIDRCLAGAHRRDPRFKATVELADVKSGYLAKPGDRVVEIMRASVKSVRDGVEPELRAAGWLGDTASFGHQVPTVIFGPGGEPVYCPDEHLSLDDIVEATQVYTQFAVRALGSQDS*