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scnpilot_solids2_trim150_scaffold_11_curated

Search features with annotation key words

Displaying items 1-30 of 249 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_11_curated_1
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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1..4116
DNA (4116bp) protein (1372aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z3Y3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM64016.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
S-layer protein
scnpilot_solids2_trim150_scaffold_11_curated_2
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4322..4816
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PEB2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD63827.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
putative Cupin 2
scnpilot_solids2_trim150_scaffold_11_curated_3
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5064..6269
DNA (1206bp) protein (402aa)
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Peptidase dimerization domain protein n=1 Tax=Frankia sp. EUN1f RepID=D3D228_9ACTO
Peptidase dimerization domain protein {ECO:0000313|EMBL:EFC82996.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
scnpilot_solids2_trim150_scaffold_11_curated_4
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6269..6688
DNA (420bp) protein (140aa)
cobalamin B12-binding domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
Cobalamin B12-binding domain protein n=1 Tax=Frankia sp. EUN1f RepID=D3D229_9ACTO
Cobalamin B12-binding domain protein {ECO:0000313|EMBL:EFC82997.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
scnpilot_solids2_trim150_scaffold_11_curated_5
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6685..8277
DNA (1593bp) protein (531aa)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:EFC82998.1}; EC=5.4.99.2 {ECO:0000313|EMBL:EFC82998.1};; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
methylmalonyl-CoA mutase N-terminal domain-containing protein; K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Frankia sp. EUN1f RepID=D3D230_9ACTO
scnpilot_solids2_trim150_scaffold_11_curated_6
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8271..9437
DNA (1167bp) protein (389aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Frankia sp. EUN1f RepID=D3D231_9ACTO
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EFC82999.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
glucose dehydrogenase
scnpilot_solids2_trim150_scaffold_11_curated_7
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9434..10591
DNA (1158bp) protein (386aa)
Peptidase M20 n=1 Tax=Frankia sp. EUN1f RepID=D3D232_9ACTO
Peptidase M20 {ECO:0000313|EMBL:EFC83000.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
peptidase M20
scnpilot_solids2_trim150_scaffold_11_curated_8
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10608..11600
DNA (993bp) protein (331aa)
5,10-methylenetetrahydromethanopterin reductase {ECO:0000313|EMBL:EFC83001.1}; EC=1.5.99.11 {ECO:0000313|EMBL:EFC83001.1};; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
5,10-methylenetetrahydromethanopterin reductase (EC:1.5.99.11); K00320 coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase [EC:1.5.99.11]
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Frankia sp. EUN1f RepID=D3D233_9ACTO
scnpilot_solids2_trim150_scaffold_11_curated_9
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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11597..12565
DNA (969bp) protein (323aa)
Leucyl aminopeptidase (Aminopeptidase T)-like protein n=1 Tax=Frankia sp. EUN1f RepID=D3D236_9ACTO
Leucyl aminopeptidase (Aminopeptidase T)-like protein {ECO:0000313|EMBL:EFC83004.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_11_curated_10
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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12659..13339
DNA (681bp) protein (227aa)
Transcriptional regulator, GntR family n=1 Tax=Frankia sp. EUN1f RepID=D3D234_9ACTO
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFC83002.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_11_curated_11
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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13368..13862
DNA (495bp) protein (165aa)
methylmalonyl-CoA epimerase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
Methylmalonyl-CoA epimerase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKX2_MARHT
Tax=RBG_16_KB1_OP1_55_9_curated
scnpilot_solids2_trim150_scaffold_11_curated_12
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13938..15413
DNA (1476bp) protein (492aa)
aldehyde dehydrogenase (EC:1.2.1.3); K00146 phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
Aldehyde Dehydrogenase n=1 Tax=Frankia sp. EUN1f RepID=D3CVY2_9ACTO
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EFC85248.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
scnpilot_solids2_trim150_scaffold_11_curated_13
Gluconacetobacter sp. SXCC-1, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15547..16566
DNA (1020bp) protein (340aa)
alcohol dehydrogenase; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
Alcohol dehydrogenase n=1 Tax=Gluconacetobacter sp. SXCC-1 RepID=F3S9I6_9PROT
Alcohol dehydrogenase {ECO:0000313|EMBL:EGG76465.1}; TaxID=1004836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter sp. SXCC-1.;"
scnpilot_solids2_trim150_scaffold_11_curated_14
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16623..17933
DNA (1311bp) protein (437aa)
mtaD; 5-methylthioadenosine/s-adenosylhomocysteine deaminase; K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
Amidohydrolase n=1 Tax=Frankia sp. EUN1f RepID=D3D235_9ACTO
Amidohydrolase {ECO:0000313|EMBL:EFC83003.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
scnpilot_solids2_trim150_scaffold_11_curated_15
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17985..19286
DNA (1302bp) protein (434aa)
mtaD; 5-methylthioadenosine/s-adenosylhomocysteine deaminase; K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
Amidohydrolase n=1 Tax=Frankia sp. EUN1f RepID=D3D235_9ACTO
Amidohydrolase {ECO:0000313|EMBL:EFC83003.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
scnpilot_solids2_trim150_scaffold_11_curated_16
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19286..20290
DNA (1005bp) protein (335aa)
Amidohydrolase 2 n=1 Tax=Frankia sp. EUN1f RepID=D3D238_9ACTO
Amidohydrolase 2 {ECO:0000313|EMBL:EFC83006.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
TIM-barrel fold metal-dependent hydrolase
scnpilot_solids2_trim150_scaffold_11_curated_17
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

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20349..20996
DNA (648bp) protein (216aa)
tenA; transcriptional regulator tenA/thi-4; K03707 thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
Transcriptional regulator tenA/thi-4 n=1 Tax=Bacillus pseudofirmus (strain OF4) RepID=D3FXH1_BACPE
Tax=RIFOXYA1_FULL_Alicyclobacillus_53_8_curated
scnpilot_solids2_trim150_scaffold_11_curated_18
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21099..21884
DNA (786bp) protein (262aa)
ABC transporter related protein n=2 Tax=Frankia sp. EUN1f RepID=D3CVY3_9ACTO
ABC transporter related protein {ECO:0000313|EMBL:EFC85249.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
ABC transporter; K15600 putative hydroxymethylpyrimidine transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_11_curated_19
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21881..22720
DNA (840bp) protein (280aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J8K0_FRASU
ABC transporter permease; K15599 putative hydroxymethylpyrimidine transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADP78443.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_solids2_trim150_scaffold_11_curated_20
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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22923..24023
DNA (1101bp) protein (367aa)
NMT1/THI5 like domain protein n=1 Tax=Frankia sp. EUN1f RepID=D3D227_9ACTO
NMT1/THI5 like domain protein {ECO:0000313|EMBL:EFC82995.1}; Flags: Precursor;; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
ABC transporter substrate-binding protein; K15598 putative hydroxymethylpyrimidine transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_11_curated_21
Mycobacterium thermoresistibile, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24076..24777
DNA (702bp) protein (234aa)
tena/thi-4 family protein; K03707 thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
Tena/thi-4 family protein n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CM79_MYCTH
Tena/thi-4 family protein {ECO:0000313|EMBL:EHI11032.1}; TaxID=1078020 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium thermoresistibile ATCC 19527.;"
scnpilot_solids2_trim150_scaffold_11_curated_22
unknown

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comp(25130..25228)
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_11_curated_23
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25504..26559
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Rhodococcus opacus RepID=UPI00029CD2DE
Putative aliphatic sulfonates-binding protein {ECO:0000313|EMBL:AHK34236.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
nmt1/thi5 like domain-containing protein
scnpilot_solids2_trim150_scaffold_11_curated_24
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26614..29055
DNA (2442bp) protein (814aa)
carbon-monoxide dehydrogenase (EC:1.2.99.2); K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2]
hypothetical protein n=1 Tax=Streptomyces sp. CNQ766 RepID=UPI00037129B0
Xanthine dehydrogenase {ECO:0000313|EMBL:EQD81745.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
scnpilot_solids2_trim150_scaffold_11_curated_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

29057..30040
DNA (984bp) protein (328aa)
amidohydrolase 2; K03392 aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
Amidohydrolase 2 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5N1_SPHTD
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
scnpilot_solids2_trim150_scaffold_11_curated_26
Streptomyces sp. NTK 937, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30050..30871
DNA (822bp) protein (274aa)
ABC transporter ATP-binding protein n=1 Tax=Rhodococcus opacus RepID=UPI00029CB58D
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDQ71173.1}; TaxID=1487711 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NTK 937.;"
ABC transporter ATP-binding protein
scnpilot_solids2_trim150_scaffold_11_curated_27
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30917..31786
DNA (870bp) protein (290aa)
ABC transporter permease n=1 Tax=Rhodococcus opacus RepID=UPI00029CD1D0
Taurine transport system permease protein tauC {ECO:0000313|EMBL:AHK34234.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
ABC transporter permease; K02050 NitT/TauT family transport system permease protein
scnpilot_solids2_trim150_scaffold_11_curated_28
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31836..32723
DNA (888bp) protein (296aa)
Molybdopterin dehydrogenase, FAD-binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUV7_RUBXD
Molybdopterin dehydrogenase {ECO:0000313|EMBL:EXU69433.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
molybdopterin dehydrogenase protein
scnpilot_solids2_trim150_scaffold_11_curated_29
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32795..33265
DNA (471bp) protein (157aa)
Carbon monoxide dehydrogenase small chain {ECO:0000313|EMBL:CEL15844.1}; EC=1.2.99.2 {ECO:0000313|EMBL:CEL15844.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
carbon monoxide dehydrogenase (EC:1.2.99.2); K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003752469
scnpilot_solids2_trim150_scaffold_11_curated_30
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33335..34570
DNA (1236bp) protein (412aa)
CoA transferase n=1 Tax=Rhodococcus opacus RepID=UPI00029CC35E
CaiB/baiF CoA-transferase family protein C7orf10 {ECO:0000313|EMBL:AHK35066.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
CaiB/BaiF family protein
Displaying items 1-30 of 249 in total

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