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scnpilot_solids2_trim150_scaffold_901_curated_18

Organism: solids_Actinobacteria_2

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 1 ASCG 10 / 38
Location: comp(14796..15824)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix, type 11 n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B3I6_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 335.0
  • Bit_score: 389
  • Evalue 2.60e-105
helix-turn-helix type 11 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 335.0
  • Bit_score: 389
  • Evalue 8.00e-106
Helix-turn-helix, type 11 {ECO:0000313|EMBL:ACZ87502.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 335.0
  • Bit_score: 389
  • Evalue 3.60e-105

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Taxonomy

Streptosporangium roseum → Streptosporangium → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGAATCTCATGGCGCCGGCCGAGATCAGCCCCACGGCCCGGGCGCTGCTTGCGCTGGAGACGCTGCAGCAGCGGCCCGGTGTCACCGCCGATGAACTGGCCGTCCGGCTCGGCGTCACCGACCGTGCCGCGCGGCGGTACGTCGCGATCCTGCGCGAGGCGGGCATCGAAGTGCAGTCCACCCCCGGCCGGTACGGCGGCTACCGGATCGGTCGGGGACTTCGGCTGCCGCCCATGGTGTTCACCGCCGCCGAGGCCTTAGGGCTGGTGATGGCGGTGCTGGACGGTCAGCACGCCGCCGACGATCCGACCGAACCGGTGGGTGCGGCGCTGGGCAAATTGATCCGCGCGCTGCCCGACGGGGTGGCTGTCCCGGCCCGCACCCTGCGCGAGCACGCGCTGGCCGCGCCGCGTCGCGACACCGGGCGCCCCGATCCCGACGTCACCAGCGCACTCGTCGGCGCGGTGGCCGCCCGTCGCCGCGCCCGCGTGGGCTACCGCAGCGCCTCCGGACACGCGGCAGACCTGGAGGTCGACCCCTGGGCTGTCGTGGTGCGCTACGGCCGCTGGTATCTGCTGTGCTTCGCGCACGGGCCGGGTGAGGTGCGGACGCTGCGCATCGACCGGGTCACCTCGGTCGAGGTGCTTGCCGGCTCGTTCCGGCCGCCGGCGGACCTGGATCCGGCGGCGTCCCTGGAGGAGCATCTGGGCAGCGGCTGGGCGCTGCGCACCGAGGTCATTTTCGACGCGCCGCTGGCGGAGGTGCAGCCGTGGGTGTCGGCCACCATGGGCCGGTTGACGCCGTCCGACGACGGTGCCCGGTGCGTGCTGCTCGGCAGCACCCGCAATCCGGCGATGTACGCCGGCGAGCGGCTGGCCGCGGTGCCGTTCGAGTTTCATGTGGTGGGCGGGGACGAGCTACGGCAGGCGGTGACGGAGGTGGCCGAGCGGCTGGCACGGGCCGCACAGACCGACCACGATCCGGTAACACGGCCTCCGGCGACGACCCCGCGTCCCAGGGGGAGGTAG
PROTEIN sequence
Length: 343
MNLMAPAEISPTARALLALETLQQRPGVTADELAVRLGVTDRAARRYVAILREAGIEVQSTPGRYGGYRIGRGLRLPPMVFTAAEALGLVMAVLDGQHAADDPTEPVGAALGKLIRALPDGVAVPARTLREHALAAPRRDTGRPDPDVTSALVGAVAARRRARVGYRSASGHAADLEVDPWAVVVRYGRWYLLCFAHGPGEVRTLRIDRVTSVEVLAGSFRPPADLDPAASLEEHLGSGWALRTEVIFDAPLAEVQPWVSATMGRLTPSDDGARCVLLGSTRNPAMYAGERLAAVPFEFHVVGGDELRQAVTEVAERLARAAQTDHDPVTRPPATTPRPRGR*