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scnpilot_solids2_trim150_scaffold_901_curated

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_901_curated_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..308)
DNA (306bp) protein (102aa)
N-acetylglutamate synthase; K00619 amino-acid N-acetyltransferase [EC:2.3.1.1]
GCN5-related N-acetyltransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X9J3_NAKMY
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACV79151.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_901_curated_2
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

326..1879
DNA (1554bp) protein (518aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1449976 species="Bacteria; Ac
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI000364451B
MiaB-like tRNA modifying protein YliG
scnpilot_solids2_trim150_scaffold_901_curated_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2036..2644
DNA (609bp) protein (203aa)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X9J5_NAKMY
CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase {ECO:0000313|EMBL:ACV79153.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_901_curated_4
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2641..3210
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00035F7E68
CinA domain-containing protein; K03743
CinA domain protein {ECO:0000313|EMBL:ACV79154.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_901_curated_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3296..3652
DNA (357bp) protein (119aa)
Transcriptional regulator, XRE family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X9J7_NAKMY
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACV79155.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_901_curated_6
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3671..4273
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NJU7_KITSK
Uncharacterized protein {ECO:0000313|EMBL:KDN81703.1}; TaxID=1348663 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_901_curated_7
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4270..4758)
DNA (489bp) protein (163aa)
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3]
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
Dihydrofolate reductase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PSR9_KRIFD
scnpilot_solids2_trim150_scaffold_901_curated_8
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4841..5635)
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45]
Thymidylate synthase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X9J9_NAKMY
scnpilot_solids2_trim150_scaffold_901_curated_9
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5735..6151
DNA (417bp) protein (139aa)
Polyketide cyclase/dehydrase n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9SZS1_MICAI
polyketide cyclase/dehydrase
Polyketide cyclase/dehydrase {ECO:0000313|EMBL:ADL45203.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
scnpilot_solids2_trim150_scaffold_901_curated_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6189..7520)
DNA (1332bp) protein (444aa)
Diguanylate cyclase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XIW4_NAKMY
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ACV76551.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_901_curated_11
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7685..8557)
DNA (873bp) protein (291aa)
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
Modification methylase, HemK family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X937_NAKMY
Modification methylase, HemK family {ECO:0000313|EMBL:ACV81135.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_901_curated_12
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8554..9210)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Streptomyces sulphureus RepID=UPI000375D7E4
Kitasatospora griseola strain MF730-N6 RKJC_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ66667.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_901_curated_13
Dietzia cinnamea, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9207..10058)
DNA (852bp) protein (284aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=910954 species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia cinnamea P4.;"
nadE; NAD synthetase; K01916 NAD+ synthase [EC:6.3.1.5]
NH(3)-dependent NAD(+) synthetase n=1 Tax=Dietzia cinnamea P4 RepID=E6J4J5_9ACTO
scnpilot_solids2_trim150_scaffold_901_curated_14
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10134..12236)
DNA (2103bp) protein (701aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI000378112F
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AEH07641.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
scnpilot_solids2_trim150_scaffold_901_curated_15
unknown

Not on your lists

12263..12787
DNA (525bp) protein (175aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_901_curated_16
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13290..14402
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037E221D
Glycosyl hydrolase {ECO:0000313|EMBL:AIJ24325.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_901_curated_17
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14442..14744
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V6F8_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EID55711.1}; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_901_curated_18
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14796..15824)
DNA (1029bp) protein (343aa)
Helix-turn-helix, type 11 n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B3I6_STRRD
helix-turn-helix type 11 domain-containing protein
Helix-turn-helix, type 11 {ECO:0000313|EMBL:ACZ87502.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
scnpilot_solids2_trim150_scaffold_901_curated_19
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15872..16675
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Ruania albidiflava RepID=UPI0003B355A7
Putative Actinobacterial protein {ECO:0000313|EMBL:CDO08626.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_901_curated_20
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16726..17586)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI000382A2C5
Uncharacterized protein {ECO:0000313|EMBL:AHH98032.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
type 11 methyltransferase
scnpilot_solids2_trim150_scaffold_901_curated_21
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17642..20059)
DNA (2418bp) protein (806aa)
Excinuclease abc subunit a uvra1 n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FG71_VERMA
Excinuclease abc subunit a uvra1 {ECO:0000313|EMBL:AEB43815.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
excinuclease ABC subunit A
scnpilot_solids2_trim150_scaffold_901_curated_22
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20140..20400
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GWN1_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB08006.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
scnpilot_solids2_trim150_scaffold_901_curated_23
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20397..20795
DNA (399bp) protein (133aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
Ribonuclease VapC n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GWN0_9ACTO
hypothetical protein
scnpilot_solids2_trim150_scaffold_901_curated_24
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20977..21831
DNA (855bp) protein (285aa)
NERD domain protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A649_CELGA
Uncharacterized protein {ECO:0000313|EMBL:EYR65283.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
NERD domain protein
scnpilot_solids2_trim150_scaffold_901_curated_25
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21930..22571)
DNA (642bp) protein (214aa)
Transcriptional regulator, HxlR family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X9P1_NAKMY
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ACV79199.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_901_curated_26
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22588..23022)
DNA (435bp) protein (145aa)
glyoxalase n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00035E616A
glyoxalase/bleomycin resistance protein/dioxygenase; K07032
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACV79200.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying 26 items

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