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scnpilot_solids2_trim150_scaffold_2245_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2245_curated_1
Mycobacterium intracellulare, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(148..567)
DNA (420bp) protein (140aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1335421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium intracellulare MIN_052511_1280.;"
Ribonuclease VapC n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NFF2_KITSK
PilT protein domain-containing protein; K07062
scnpilot_solids2_trim150_scaffold_2245_curated_2
unknown

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comp(570..860)
DNA (291bp) protein (97aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2245_curated_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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878..2275
DNA (1398bp) protein (466aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4]
Adenylosuccinate synthetase n=1 Tax=Patulibacter medicamentivorans RepID=H0E9H6_9ACTN
scnpilot_solids2_trim150_scaffold_2245_curated_4
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2376..3665
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SK57_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EFI36260.1}; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfonatronospira.;" source="Desulfonatronospira thiodismutans ASO3-1.;"
hypothetical protein; K07133
scnpilot_solids2_trim150_scaffold_2245_curated_5
unknown

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3859..4632
DNA (774bp) protein (258aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2245_curated_6
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4799..5629
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00035D62BD
Uncharacterized protein {ECO:0000313|EMBL:EYD78315.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
GCN5-like N-acetyltransferase
scnpilot_solids2_trim150_scaffold_2245_curated_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5757..6341
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B40FC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB54180.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_2245_curated_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(6378..7457)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZA3_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB51868.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_2245_curated_9
Streptomyces pratensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7458..8528)
DNA (1071bp) protein (357aa)
Htaa domain protein n=1 Tax=Streptomyces flavogriseus (strain ATCC 33331 / DSM 40990 / IAF-45CD) RepID=E8WF81_STRFA
Htaa domain-containing protein
Htaa domain protein {ECO:0000313|EMBL:ADW05965.1}; Flags: Precursor;; TaxID=591167 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pratensis (strain ATCC 33331 / IAF-45CD).;"
scnpilot_solids2_trim150_scaffold_2245_curated_10
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

8686..9570
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E6T5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10618.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_2245_curated_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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9574..10557
DNA (984bp) protein (328aa)
Transport system permease protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZA6_CONWI
transporter permease; K02015 iron complex transport system permease protein
Transport system permease protein {ECO:0000313|EMBL:ADB51871.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_2245_curated_12
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10557..10730
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E6T3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10616.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
Displaying 12 items

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