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scnpilot_solids2_trim150_scaffold_564_curated

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_564_curated_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(550..1224)
DNA (675bp) protein (225aa)
Phenazine biosynthesis PhzC/PhzF protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUD0_RUBXD
phenazine biosynthesis PhzC/PhzF protein; K06998
Phenazine biosynthesis PhzC/PhzF protein {ECO:0000313|EMBL:ABG04998.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
scnpilot_solids2_trim150_scaffold_564_curated_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1224..2576)
DNA (1353bp) protein (451aa)
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2]
Glutamine synthetase, type I n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5V7_CONWI
Glutamine synthetase, type I {ECO:0000313|EMBL:ADB52656.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_564_curated_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

2849..3415
DNA (567bp) protein (189aa)
Carboxymuconolactone decarboxylase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5V9_CONWI
carboxymuconolactone decarboxylase
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ADB52658.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_564_curated_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3565..4287)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F339_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB50319.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_564_curated_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4412..4942)
DNA (531bp) protein (177aa)
Rare lipoprotein A n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEZ1_CONWI
Rare lipoprotein A
Rare lipoprotein A {ECO:0000313|EMBL:ADB51708.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_564_curated_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5732..6352)
DNA (621bp) protein (207aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
LexA family transcriptional repressor (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88]
LexA repressor n=1 Tax=Patulibacter medicamentivorans RepID=H0E864_9ACTN
scnpilot_solids2_trim150_scaffold_564_curated_7
unknown

Not on your lists

7182..7544
DNA (363bp) protein (121aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_564_curated_8
unknown

Not on your lists

comp(8315..9025)
DNA (711bp) protein (237aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_564_curated_9
unknown

Not on your lists

9140..9358
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_564_curated_10
unknown

Not on your lists

comp(10285..11175)
DNA (891bp) protein (297aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_564_curated_11
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11245..13098)
DNA (1854bp) protein (618aa)
heavy metal translocating P-type ATPase; K01552 [EC:3.6.3.-]
Heavy metal translocating P-type ATPase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YAZ5_THEBD
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ADG88362.1}; Flags: Precursor;; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
scnpilot_solids2_trim150_scaffold_564_curated_12
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13172..13450)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Mycobacterium RepID=UPI000374CDAF
Uncharacterized protein {ECO:0000313|EMBL:KKC02372.1}; TaxID=244292 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_564_curated_13
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13473..15041)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E6X2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10575.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein; K07028
scnpilot_solids2_trim150_scaffold_564_curated_14
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15191..15967)
DNA (777bp) protein (259aa)
membrane protein n=1 Tax=Salinispora arenicola RepID=UPI000361179E
Uncharacterized protein {ECO:0000313|EMBL:AJT66504.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
hypothetical protein; K07090
scnpilot_solids2_trim150_scaffold_564_curated_15
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15996..16325)
DNA (330bp) protein (110aa)
Transcriptional regulator ArsR family n=1 Tax=Patulibacter medicamentivorans RepID=H0E1A3_9ACTN
Transcriptional regulator ArsR family {ECO:0000313|EMBL:EHN12542.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_564_curated_16
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16393..16644
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E1A6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN12545.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_564_curated_17
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16641..18836
DNA (2196bp) protein (732aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E1A5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN12544.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
MMPL domain-containing protein
scnpilot_solids2_trim150_scaffold_564_curated_18
GWB1_OD1_57_6, Parcubacteria, Bacteria

Not on your lists

comp(19393..20193)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262791F
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KKW46916.1}; TaxID=1618889 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_57_6.;"
short-chain dehydrogenase
scnpilot_solids2_trim150_scaffold_564_curated_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20315..22696
DNA (2382bp) protein (794aa)
Phosphoketolase {ECO:0000313|EMBL:ADB53396.1}; EC=4.1.2.9 {ECO:0000313|EMBL:ADB53396.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
phosphoketolase (EC:4.1.2.9)
Phosphoketolase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCA1_CONWI
scnpilot_solids2_trim150_scaffold_564_curated_20
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

22672..23805
DNA (1134bp) protein (378aa)
ackA; acetate kinase A (EC:2.7.2.1); K00925 acetate kinase [EC:2.7.2.1]
Acetate kinase n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RDU3_FRAAA
Tax=RBG_16_RIF_CHLX_72_14_curated
scnpilot_solids2_trim150_scaffold_564_curated_21
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24085..24366
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0J270_MYCSM
Adenylate cyclase {ECO:0000313|EMBL:EWT01364.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_564_curated_22
unknown

Not on your lists

24468..24683
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_564_curated_23
unknown

Not on your lists

comp(24739..25353)
DNA (615bp) protein (205aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_564_curated_24
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(25363..26475)
DNA (1113bp) protein (371aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Patulibacter medicamentivorans RepID=H0E1B6_9ACTN
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EHN12555.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
scnpilot_solids2_trim150_scaffold_564_curated_25
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27439..28863
DNA (1425bp) protein (475aa)
treT; Trehalose synthase; K13057 trehalose synthase [EC:2.4.1.245]
Trehalose synthase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MXW3_CORCM
Trehalose synthase {ECO:0000313|EMBL:AFE10529.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
scnpilot_solids2_trim150_scaffold_564_curated_26
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28860..30683
DNA (1824bp) protein (608aa)
Acetate--CoA ligase (NDP forming) n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F142_MODMB
acetate--CoA ligase (NDP forming)
Acetate--CoA ligase (NDP forming) {ECO:0000313|EMBL:CCH89355.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
scnpilot_solids2_trim150_scaffold_564_curated_27
unknown

Not on your lists

30818..31144
DNA (327bp) protein (109aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_564_curated_28
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(31450..32097)
DNA (648bp) protein (216aa)
DNA-binding response regulator LuxR family n=1 Tax=Patulibacter medicamentivorans RepID=H0E179_9ACTN
DNA-binding response regulator LuxR family {ECO:0000313|EMBL:EHN12518.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
LuxR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_564_curated_29
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

32185..32829
DNA (645bp) protein (215aa)
LuxR family transcriptional regulator n=1 Tax=Patulibacter americanus RepID=UPI0003B334FB
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB49727.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 29 items

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