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scnpilot_solids2_trim150_scaffold_2004_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2004_curated_1
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(281..1528)
DNA (1248bp) protein (416aa)
amidohydrolase; K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
Amidohydrolase n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L8Y0_MAGSM
Amidohydrolase {ECO:0000313|EMBL:ABK44423.1}; TaxID=156889 species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1).;"
scnpilot_solids2_trim150_scaffold_2004_curated_2
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1599..2279)
DNA (681bp) protein (227aa)
methylthioadenosine phosphorylase (EC:2.4.2.28)
Methylthioadenosine phosphorylase {ECO:0000313|EMBL:ABK44397.1}; EC=2.4.2.28 {ECO:0000313|EMBL:ABK44397.1};; TaxID=156889 species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1).;"
Methylthioadenosine phosphorylase n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L8V4_MAGSM
scnpilot_solids2_trim150_scaffold_2004_curated_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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2574..3125
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1U2_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB54123.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_2004_curated_4
R_OD1_47_10b, Parcubacteria, Bacteria

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comp(3073..3693)
DNA (621bp) protein (207aa)
GTP pyrophosphokinase n=1 Tax=Listeria monocytogenes FSL J1-208 RepID=H7CIY8_LISMN
metal dependent phosphohydrolase
Tax=RIFCSPHIGHO2_01_FULL_OD1_47_10b_curated
scnpilot_solids2_trim150_scaffold_2004_curated_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(3690..4595)
DNA (906bp) protein (302aa)
Metallo-beta-lactamase family protein id=2777649 bin=GWC2_Chloroflexi_73_18 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
beta-lactamase-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
scnpilot_solids2_trim150_scaffold_2004_curated_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(4592..5023)
DNA (432bp) protein (144aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
scnpilot_solids2_trim150_scaffold_2004_curated_7
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5151..5771
DNA (621bp) protein (207aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:EHN09049.1}; EC=2.3.1.51 {ECO:0000313|EMBL:EHN09049.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
putative acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
2-acyl-glycerophospho-ethanolamine acyltransferase n=1 Tax=Patulibacter americanus RepID=UPI0003B4FB55
scnpilot_solids2_trim150_scaffold_2004_curated_8
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5843..6358)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNY243 RepID=UPI0003669C68
Uncharacterized protein {ECO:0000313|EMBL:KJS56982.1}; TaxID=1615590 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus subsp. indigoferus.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2004_curated_9
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6355..7068)
DNA (714bp) protein (238aa)
anti-sigma factor n=1 Tax=Rhodococcus opacus RepID=UPI00029CC72E
Uncharacterized protein {ECO:0000313|EMBL:AHK32028.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
putative transmembrane anti-sigma factor
scnpilot_solids2_trim150_scaffold_2004_curated_10
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(7058..7561)
DNA (504bp) protein (168aa)
RNA polymerase sigma factor n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SDU3_GEOOG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
scnpilot_solids2_trim150_scaffold_2004_curated_11
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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comp(7693..7842)
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Dehalococcoides mccartyi RepID=V5QDT2_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_60_22_curated
scnpilot_solids2_trim150_scaffold_2004_curated_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8071..9228
DNA (1158bp) protein (386aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=2 Tax=Sulfobacillus acidophilus RepID=F8I7E4_SULAT
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AEJ40015.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus acidophilus (strain TPY).;"
scnpilot_solids2_trim150_scaffold_2004_curated_13
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9311..9757
DNA (447bp) protein (149aa)
thioesterase superfamily protein n=1 Tax=Schlesneria paludicola RepID=UPI00029ABC9B
thioesterase superfamily protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
scnpilot_solids2_trim150_scaffold_2004_curated_14
Gordonia malaquae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9758..11197)
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B60723
Uncharacterized protein {ECO:0000313|EMBL:GAC80162.1}; TaxID=1223542 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia malaquae NBRC 108250.;"
hypothetical protein
Displaying 14 items

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