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scnpilot_solids2_trim150_scaffold_683_curated

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_683_curated_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(217..720)
DNA (504bp) protein (168aa)
Transcriptional regulator MarR family n=1 Tax=Patulibacter medicamentivorans RepID=H0E4R5_9ACTN
Transcriptional regulator MarR family {ECO:0000313|EMBL:EHN11325.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
MarR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_683_curated_2
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1110..2171
DNA (1062bp) protein (354aa)
Low temperature requirement A n=1 Tax=Frankia sp. CN3 RepID=G6HA58_9ACTO
Membrane protein {ECO:0000313|EMBL:ETK32075.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
low temperature requirement A
scnpilot_solids2_trim150_scaffold_683_curated_3
unknown

Not on your lists

comp(2158..2931)
DNA (774bp) protein (258aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_683_curated_4
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3036..4157)
DNA (1122bp) protein (374aa)
CdaR family transcriptional regulator n=1 Tax=Nocardioides sp. CF8 RepID=R7Y2L3_9ACTO
CdaR family transcriptional regulator {ECO:0000313|EMBL:EON25520.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
CdaR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_683_curated_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4253..7867)
DNA (3615bp) protein (1205aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FB91_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB53283.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_683_curated_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7864..12024)
DNA (4161bp) protein (1387aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF04549.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
scnpilot_solids2_trim150_scaffold_683_curated_7
unknown

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comp(12254..12793)
DNA (540bp) protein (180aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_683_curated_8
unknown

Not on your lists

comp(13034..14017)
DNA (984bp) protein (328aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_683_curated_9
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14126..15415)
DNA (1290bp) protein (430aa)
TetR family transcriptional regulator n=1 Tax=Saccharomonospora halophila RepID=UPI0003695263
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:GAJ85413.1}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
putative transcriptional regulator
scnpilot_solids2_trim150_scaffold_683_curated_10
unknown

Not on your lists

15553..15825
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_683_curated_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

15905..17626
DNA (1722bp) protein (574aa)
Glycoside hydrolase 15-related n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATD7_RUBXD
glycoside hydrolase 15-like protein
Glycoside hydrolase 15-related {ECO:0000313|EMBL:ABG05341.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
scnpilot_solids2_trim150_scaffold_683_curated_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17683..18462)
DNA (780bp) protein (260aa)
Type 11 methyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5Q7_SORCE
type 11 methyltransferase
Type 11 methyltransferase {ECO:0000313|EMBL:AGP39796.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
scnpilot_solids2_trim150_scaffold_683_curated_13
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18506..19030
DNA (525bp) protein (175aa)
N-acetyltransferase GCN5; K03825 putative acetyltransferase [EC:2.3.1.-]
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00035C3C91
Putative acetyltransferase {ECO:0000313|EMBL:GAB89900.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
scnpilot_solids2_trim150_scaffold_683_curated_14
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19132..19344)
DNA (213bp) protein (71aa)
TIGR00725 family protein n=1 Tax=Frankia sp. QA3 RepID=I9A0Z4_9ACTO
TIGR00725 family protein {ECO:0000313|EMBL:EIV93016.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein; K06966
scnpilot_solids2_trim150_scaffold_683_curated_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(19442..21739)
DNA (2298bp) protein (766aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0P2_CONWI
hypothetical protein; K06877 DEAD/DEAH box helicase domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:ADB53976.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_683_curated_16
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21819..22655)
DNA (837bp) protein (279aa)
dihydropteroate synthase; K00796 dihydropteroate synthase [EC:2.5.1.15]
Dihydropteroate synthase protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SU87_9DELT
Dihydropteroate synthase protein {ECO:0000313|EMBL:ERK92285.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
scnpilot_solids2_trim150_scaffold_683_curated_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

22677..23492
DNA (816bp) protein (272aa)
Sucrose-6F-phosphate phosphohydrolase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0N8_CONWI
sucrose-6F-phosphate phosphohydrolase; K07024
Sucrose-6F-phosphate phosphohydrolase {ECO:0000313|EMBL:ADB53972.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_683_curated_18
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(23456..24460)
DNA (1005bp) protein (335aa)
FTR1 family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4A0_9CHLR
FTR1 family protein {ECO:0000313|EMBL:EFH81330.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
iron permease FTR1; K07243 high-affinity iron transporter
scnpilot_solids2_trim150_scaffold_683_curated_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

24532..25245
DNA (714bp) protein (238aa)
Iron (Metal) dependent repressor, DtxR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0L9_CONWI
DtxR family iron (metal) dependent repressor
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:ADB53953.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_683_curated_20

Not on your lists

comp(25242..25865)
DNA (624bp) protein (208aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=halophilic archaeon DL31 RepID=G2MHH0_9ARCH
Glyoxalase/bleomycin resistance protein/dioxygenase; K07104
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEN06639.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
scnpilot_solids2_trim150_scaffold_683_curated_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(25948..26649)
DNA (702bp) protein (234aa)
Anti-ECFsigma factor, ChrR n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZX2_CONWI
anti-ECFsigma factor ChrR
Anti-ECFsigma factor, ChrR {ECO:0000313|EMBL:ADB49948.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_683_curated_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(26646..27179)
DNA (534bp) protein (178aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZX3_CONWI
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB49949.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_683_curated_23
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27271..28371)
DNA (1101bp) protein (367aa)
Putative transcriptional regulator, GntR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0L6_CONWI
Aminotransferase class I/II {ECO:0000313|EMBL:KJK51792.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
GntR family transcriptional regulator
Displaying 23 items

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