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scnpilot_solids2_trim150_scaffold_1811_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1811_curated_1
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(173..940)
DNA (768bp) protein (256aa)
Putative high-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind) n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RTU6_FRAAA
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EXU64351.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
high-affinity branched-chain amino acid ABC transporter ATP-binding protein
scnpilot_solids2_trim150_scaffold_1811_curated_2
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(940..3699)
DNA (2760bp) protein (920aa)
hypothetical protein n=1 Tax=Streptomyces canus RepID=UPI00036E6613
Uncharacterized protein {ECO:0000313|EMBL:EXU64352.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
ABC transporter
scnpilot_solids2_trim150_scaffold_1811_curated_3
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3779..5134)
DNA (1356bp) protein (452aa)
Lipoprotein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HPG5_9ACTO
Lipoprotein {ECO:0000313|EMBL:EDY54740.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
SCD10.33c; lipoprotein
scnpilot_solids2_trim150_scaffold_1811_curated_4
unknown

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5178..5366
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1811_curated_5
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5276..5728)
DNA (453bp) protein (151aa)
Phosphoserine aminotransferase {ECO:0000313|EMBL:ELQ85656.1}; EC=2.6.1.52 {ECO:0000313|EMBL:ELQ85656.1};; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
Uncharacterized protein n=7 Tax=Mycobacterium abscessus RepID=I8B3J0_MYCAB
hypothetical protein
scnpilot_solids2_trim150_scaffold_1811_curated_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6290..7759)
DNA (1470bp) protein (490aa)
pyruvate carboxylase; K01571 oxaloacetate decarboxylase, alpha subunit [EC:4.1.1.3]
Pyruvate carboxylase {ECO:0000313|EMBL:AEA23785.1}; EC=6.4.1.1 {ECO:0000313|EMBL:AEA23785.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Pyruvate carboxylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVG5_PSEUX
scnpilot_solids2_trim150_scaffold_1811_curated_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7759..9138)
DNA (1380bp) protein (460aa)
Biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
Biotin carboxylase {ECO:0000313|EMBL:AEA23784.1}; EC=6.3.4.14 {ECO:0000313|EMBL:AEA23784.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Biotin carboxylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVG4_PSEUX
scnpilot_solids2_trim150_scaffold_1811_curated_8
Corynebacterium imitans, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9149..9712)
DNA (564bp) protein (188aa)
Acetyl-CoA carboxylase biotin carboxyl carrier protein n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CH64_MYCTH
Acetyl-CoA carboxylase {ECO:0000313|EMBL:AIJ33032.1}; TaxID=156978 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium imitans.;"
accB; Acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
scnpilot_solids2_trim150_scaffold_1811_curated_9
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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9715..10425
DNA (711bp) protein (237aa)
Phosphoglycerate mutase {ECO:0000313|EMBL:EWC64239.1}; EC=5.4.2.- {ECO:0000313|EMBL:EWC64239.1};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2P8N0_9ACTO
gpm; phosphoglycerate mutase
scnpilot_solids2_trim150_scaffold_1811_curated_10
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10582..11388
DNA (807bp) protein (269aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVG2_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:KGM48932.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
3-oxoacyl-ACP reductase
scnpilot_solids2_trim150_scaffold_1811_curated_11
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11407..12219
DNA (813bp) protein (271aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVG2_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:KGM48932.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
3-oxoacyl-ACP reductase
scnpilot_solids2_trim150_scaffold_1811_curated_12
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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12222..12653
DNA (432bp) protein (144aa)
Acyl dehydratase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CEL2_DESTA
acyl dehydratase
Acyl dehydratase {ECO:0000313|EMBL:AFM28003.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
Displaying 12 items

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