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scnpilot_solids2_trim150_scaffold_1271_curated

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1271_curated_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1..1155
DNA (1155bp) protein (385aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EHN09572.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EHN09572.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Long-chain-fatty-acid--CoA ligase n=1 Tax=Patulibacter medicamentivorans RepID=H0E9S3_9ACTN
AMP-dependent synthetase and ligase
scnpilot_solids2_trim150_scaffold_1271_curated_2
Halomonas huangheensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1167..2096
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AE887C
Uncharacterized protein {ECO:0000313|EMBL:ERL52859.1}; TaxID=1178482 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas huangheensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1271_curated_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

2133..3530
DNA (1398bp) protein (466aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16]
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Cysteine--tRNA ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F142_CONWI
scnpilot_solids2_trim150_scaffold_1271_curated_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3530..4183
DNA (654bp) protein (218aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F143_CONWI
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:ADB50119.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1271_curated_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

4447..5154
DNA (708bp) protein (236aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F144_CONWI
ECF subfamily RNA polymerase sigma-24 subunit; K03091 RNA polymerase sporulation-specific sigma factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB50120.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1271_curated_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5161..6159)
DNA (999bp) protein (333aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL46_PSEUX
anti-sigma regulatory factor
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:AEA24975.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
scnpilot_solids2_trim150_scaffold_1271_curated_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6289..6588)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7H4_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB50836.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1271_curated_8
unknown

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comp(6689..7846)
DNA (1158bp) protein (386aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1271_curated_9
unknown

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comp(7924..8523)
DNA (600bp) protein (200aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1271_curated_10
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8816..9523
DNA (708bp) protein (236aa)
phosphoglycerate mutase; K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1]
Phosphoglycerate mutase n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AE52_THECD
Phosphoglycerate kinase {ECO:0000313|EMBL:KEI45055.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
scnpilot_solids2_trim150_scaffold_1271_curated_11
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9532..9807)
DNA (276bp) protein (92aa)
Beta-lactamase domain protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V195_ROSS1
Competence protein ComEC/Rec2-related protein {ECO:0000313|EMBL:AJR18177.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
beta-lactamase domain-containing protein
scnpilot_solids2_trim150_scaffold_1271_curated_12
unknown

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comp(9905..10090)
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1271_curated_13
Streptomyces griseorubens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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10149..10373
DNA (225bp) protein (75aa)
divalent cation-transport integral membrane protein mnth n=1 Tax=Streptomyces viridosporus RepID=UPI0001AF0E8B
hypothetical protein
NADPH-dependent FMN reductase {ECO:0000313|EMBL:KEG38430.1}; TaxID=66897 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseorubens.;"
scnpilot_solids2_trim150_scaffold_1271_curated_14
unknown

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comp(10486..10929)
DNA (444bp) protein (148aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1271_curated_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10929..12374)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAB8_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49187.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1271_curated_16
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

12398..13315
DNA (918bp) protein (306aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA64_CONWI
glyoxalase/bleomycin resistance protein/dioxygenase; K15975 glyoxalase family protein
Tax=RBG_16_Armatimonadetes_67_12_curated
scnpilot_solids2_trim150_scaffold_1271_curated_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13346..15016
DNA (1671bp) protein (557aa)
Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) {ECO:0000256|SAAS:SAAS00080169}; EC=1.1.1.94 {ECO:0000256|SAAS:SAAS00080169};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Phospholipid/glycerol acyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F213_CONWI
phospholipid/glycerol acyltransferase
scnpilot_solids2_trim150_scaffold_1271_curated_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15038..15610
DNA (573bp) protein (191aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F214_CONWI
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB50189.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1271_curated_19
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15603..15947
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E8Z3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN09846.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1271_curated_20
unknown

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comp(15944..16426)
DNA (483bp) protein (161aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1271_curated_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16538..17329
DNA (792bp) protein (264aa)
Rhomboid family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F216_CONWI
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ADB50191.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 21 items

View Taxonomy