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scnpilot_solids2_trim150_scaffold_2303_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2303_curated_1
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..895
DNA (894bp) protein (298aa)
Bilirubin oxidase (EC:1.3.3.5)
Bilirubin oxidase n=1 Tax=Nocardioides sp. CF8 RepID=R7XZJ8_9ACTO
Bilirubin oxidase {ECO:0000313|EMBL:EON24445.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
scnpilot_solids2_trim150_scaffold_2303_curated_2

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comp(921..1640)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI0003667359
Uncharacterized protein {ECO:0000313|EMBL:KGA15040.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily
scnpilot_solids2_trim150_scaffold_2303_curated_3
Mycobacterium vulneris, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1776..2921
DNA (1146bp) protein (382aa)
Secreted peptidase n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0VPT3_MYCFO
Secreted peptidase {ECO:0000313|EMBL:CDO30670.1}; Flags: Precursor;; TaxID=547163 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium vulneris.;"
peptidase
scnpilot_solids2_trim150_scaffold_2303_curated_4
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3138..3839)
DNA (702bp) protein (234aa)
Nodulin 21-related protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EBB8_9ACTN
Nodulin 21-related protein {ECO:0000313|EMBL:EHN08994.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2303_curated_5
unknown

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4059..4610
DNA (552bp) protein (184aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2303_curated_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(4630..5280)
DNA (651bp) protein (217aa)
Transcriptional regulator, TetR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5Z4_CONWI
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADB48667.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_2303_curated_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5352..6497
DNA (1146bp) protein (382aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5Z5_CONWI
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ADB48668.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_2303_curated_8
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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6497..7447
DNA (951bp) protein (317aa)
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:EHN10793.1}; EC=4.1.3.4 {ECO:0000313|EMBL:EHN10793.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
pyruvate carboxyltransferase; K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Patulibacter medicamentivorans RepID=H0E695_9ACTN
scnpilot_solids2_trim150_scaffold_2303_curated_9
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7463..9574
DNA (2112bp) protein (704aa)
3-methylcrotonoyl-CoA carboxylase subunit alpha; K11263 acetyl-/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.3.4.14]
Acetyl/propionyl CoA carboxylase subunit alpha n=1 Tax=Streptomyces gancidicus BKS 13-15 RepID=M3BYF1_9ACTO
Acetyl/propionyl CoA carboxylase subunit alpha {ECO:0000313|EMBL:EMF29094.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus BKS 13-15.;"
scnpilot_solids2_trim150_scaffold_2303_curated_10
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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9571..11133
DNA (1563bp) protein (521aa)
Methylcrotonoyl-CoA carboxylase (EC:6.4.1.4)
acetyl-CoA carboxylase subunit beta n=1 Tax=Streptomyces RepID=UPI0003770AA2
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:KDS86564.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
scnpilot_solids2_trim150_scaffold_2303_curated_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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11140..13125
DNA (1986bp) protein (662aa)
acetoacetyl-CoA synthase; K01907 acetoacetyl-CoA synthetase [EC:6.2.1.16]
acetoacetyl-CoA synthetase n=1 Tax=Nocardiopsis baichengensis RepID=UPI00038095B6
Acetoacetyl-CoA synthase {ECO:0000313|EMBL:ADB52895.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 11 items

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