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scnpilot_solids2_trim150_scaffold_1264_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1264_curated_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(91..1254)
DNA (1164bp) protein (388aa)
Ribokinase; K00852 ribokinase [EC:2.7.1.15]
Ribokinase {ECO:0000313|EMBL:AEA24388.1}; EC=2.7.1.15 {ECO:0000313|EMBL:AEA24388.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Ribokinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL09_PSEUX
scnpilot_solids2_trim150_scaffold_1264_curated_2
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1251..2279)
DNA (1029bp) protein (343aa)
LacI family transcriptional regulator n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TWY1_9NOCA
LacI family transcriptional regulator {ECO:0000313|EMBL:AII10593.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1264_curated_3
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2290..3075)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TTR5_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:ELB94505.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1264_curated_4
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3075..3611)
DNA (537bp) protein (179aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J2J2P7_9NOCA
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EJI94122.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
scnpilot_solids2_trim150_scaffold_1264_curated_5
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3613..4101)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J1R7K9_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:AII10596.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
scnpilot_solids2_trim150_scaffold_1264_curated_6
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4233..5186
DNA (954bp) protein (318aa)
Inosine-uridine nucleoside N-ribohydrolase; K01250 pyrimidine-specific ribonucleoside hydrolase [EC:3.2.-.-]
Purine nucleosidase n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TV50_9NOCA
Nucleoside hydrolase {ECO:0000313|EMBL:AII10583.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
scnpilot_solids2_trim150_scaffold_1264_curated_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5308..6675)
DNA (1368bp) protein (456aa)
[NADP+] succinate-semialdehyde dehydrogenase (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
succinate-semialdehyde dehdyrogenase n=1 Tax=Patulibacter americanus RepID=UPI0003B58A2C
Putative succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ERK70595.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
scnpilot_solids2_trim150_scaffold_1264_curated_8
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6827..8338)
DNA (1512bp) protein (504aa)
Ammonium transporter n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TL82_9NOCA
Ammonium transporter {ECO:0000313|EMBL:AII08189.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
ammonium transporter
scnpilot_solids2_trim150_scaffold_1264_curated_9
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8638..9144
DNA (507bp) protein (169aa)
Acetyltransferase, GNAT family n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSU2_9PROT
Acetyltransferase {ECO:0000313|EMBL:KGM09428.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
putative acetyltransferase
scnpilot_solids2_trim150_scaffold_1264_curated_10
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9558..10571)
DNA (1014bp) protein (338aa)
PfkB domain protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PVL5_KRIFD
PfkB domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ADB35255.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
scnpilot_solids2_trim150_scaffold_1264_curated_11
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10617..11435)
DNA (819bp) protein (273aa)
Putative arylesterase-like protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J9S6_FRASU
arylesterase-like protein
Putative arylesterase-like protein {ECO:0000313|EMBL:ADP84579.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_solids2_trim150_scaffold_1264_curated_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11550..12011)
DNA (462bp) protein (154aa)
Transcriptional regulator, MarR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF00_CONWI
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADB51717.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1264_curated_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12008..13483)
DNA (1476bp) protein (492aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF01_CONWI
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ADB51718.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1264_curated_14

Not on your lists

13665..14288
DNA (624bp) protein (208aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1B7B9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD50080.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1264_curated_15
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14288..14695
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YWL3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM62609.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
scnpilot_solids2_trim150_scaffold_1264_curated_16
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(14684..15070)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YGC1_9FIRM
XRE family transcriptional regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
scnpilot_solids2_trim150_scaffold_1264_curated_17
unknown

Not on your lists

comp(15109..15300)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1264_curated_18
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15508..16251)
DNA (744bp) protein (248aa)
FMN reductase {ECO:0000313|EMBL:CDP51395.1}; EC=1.5.1.- {ECO:0000313|EMBL:CDP51395.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
NADH-dependent FMN reductase; K00299 FMN reductase [EC:1.5.1.38]
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B48FB8
scnpilot_solids2_trim150_scaffold_1264_curated_19
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16244..16687)
DNA (444bp) protein (148aa)
MarR family transcriptional regulator n=1 Tax=Glaciibacter superstes RepID=UPI0003B5AABF
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CDP51394.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
MarR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1264_curated_20
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16687..17688)
DNA (1002bp) protein (334aa)
N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Glaciibacter superstes RepID=UPI0003B758E9
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:EGD45229.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
luciferase-like monooxygenase
Displaying 20 items

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