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scnpilot_solids2_trim150_scaffold_2406_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2406_curated_1
Brassica oleracea, Brassica, Brassicales, rosids, Streptophyta, Viridiplantae

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2..484
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Toxoplasma gondii GT1 RepID=S7UZ80_TOXGO
Uncharacterized protein {ECO:0000313|EnsemblPlants:Bo5g115110.1}; TaxID=109376 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.;" source="Brassica oleracea var. oleracea.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2406_curated_2
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(549..2105)
DNA (1557bp) protein (519aa)
putative pyridine nucleotide-disulfide oxidoreductase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Family FAD-dependent NAD(P)-disulfide oxidoreductase n=1 Tax=Patulibacter medicamentivorans RepID=H0EB10_9ACTN
Family FAD-dependent NAD(P)-disulfide oxidoreductase {ECO:0000313|EMBL:EHN09149.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
scnpilot_solids2_trim150_scaffold_2406_curated_3
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3159..3656)
DNA (498bp) protein (166aa)
G:T/U mismatch-specific DNA glycosylase (EC:3.2.2.-)
glycerate kinase n=1 Tax=Patulibacter americanus RepID=UPI0003B7A4F5
Glycosylase {ECO:0000313|EMBL:AIF49072.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_solids2_trim150_scaffold_2406_curated_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3653..4606)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBZ4_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB51409.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_2406_curated_5
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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4631..5182
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B57AF9
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
scnpilot_solids2_trim150_scaffold_2406_curated_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5229..7148
DNA (1920bp) protein (640aa)
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8W6_CONWI
ABC transporter; K06158 ATP-binding cassette, subfamily F, member 3
ABC transporter related protein {ECO:0000313|EMBL:ADB52961.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_2406_curated_7
Mycobacterium farcinogenes, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7183..8040)
DNA (858bp) protein (286aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1802 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;"
purU; formyltetrahydrofolate deformylase (EC:3.5.1.10)
Formyltetrahydrofolate deformylase n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QUG6_MYCS2
scnpilot_solids2_trim150_scaffold_2406_curated_8
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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8185..8727
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B75179
Putative resuscitation-promoting factor RPFE {ECO:0000313|EMBL:EHN11326.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
transglycosylase domain-containing protein
scnpilot_solids2_trim150_scaffold_2406_curated_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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8928..9776
DNA (849bp) protein (283aa)
Metal dependent phosphohydrolase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8X2_CONWI
metal dependent phosphohydrolase; K09163 hypothetical protein
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ADB52967.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 9 items

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