ggKbase home page

scnpilot_solids2_trim150_scaffold_1238_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1238_curated_1
unknown

Not on your lists

comp(3..128)
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1238_curated_2
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(538..1401)
DNA (864bp) protein (288aa)
uppP; undecaprenyl-diphosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI00036E806B
scnpilot_solids2_trim150_scaffold_1238_curated_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1427..2716)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B5C5DE
Uncharacterized protein {ECO:0000313|EMBL:EHN12454.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
peptidoglycan-binding protein
scnpilot_solids2_trim150_scaffold_1238_curated_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2948..3337)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBC0_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49289.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1238_curated_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3430..4185)
DNA (756bp) protein (252aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBZ9_CONWI
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ADB51414.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1238_curated_6
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4297..5670)
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE16 RepID=UPI0003783D0A
PAS/PAC sensor-containing diguanylate cyclase
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ADP87867.1}; TaxID=573059 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain RCH1).;"
scnpilot_solids2_trim150_scaffold_1238_curated_7
unknown

Not on your lists

comp(5705..6247)
DNA (543bp) protein (181aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1238_curated_8
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

6312..6707
DNA (396bp) protein (132aa)
Lactoylglutathione lyase {ECO:0000313|EMBL:EHN10901.1}; EC=4.4.1.5 {ECO:0000313|EMBL:EHN10901.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
glyoxalase/bleomycin resistance protein/dioxygenase; K01759 lactoylglutathione lyase [EC:4.4.1.5]
glyoxalase n=1 Tax=Patulibacter americanus RepID=UPI0003B43976
scnpilot_solids2_trim150_scaffold_1238_curated_9
unknown

Not on your lists

comp(6724..7143)
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1238_curated_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7900..9999)
DNA (2100bp) protein (700aa)
Glycosyl transferase family 51 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3S4_CONWI
glycosyl transferase family protein
Glycosyl transferase family 51 {ECO:0000313|EMBL:ADB54299.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1238_curated_11
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10124..10891)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E1S3_9ACTN
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
ABC transporter; K09686 antibiotic transport system permease protein
scnpilot_solids2_trim150_scaffold_1238_curated_12
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10911..11684)
DNA (774bp) protein (258aa)
ABC transporter ATP-binding protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E1S4_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EHN12375.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
ABC transporter; K09687 antibiotic transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_1238_curated_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11788..12621
DNA (834bp) protein (278aa)
5'-3' exonuclease, N-terminal resolvase-like domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2X8_CONWI
5'-3' exonuclease
5'-3' exonuclease, N-terminal resolvase-like domain protein {ECO:0000313|EMBL:ADB54259.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1238_curated_14
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(12683..12952)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIV4_THET1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ43674.1}; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
scnpilot_solids2_trim150_scaffold_1238_curated_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13006..13845
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F051_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB50027.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1238_curated_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13976..15577)
DNA (1602bp) protein (534aa)
Carboxyl transferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9R9_CONWI
carboxyl transferase
Carboxyl transferase {ECO:0000313|EMBL:ADB51131.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1238_curated_17
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15579..16028)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6KNC9_STRNV
Uncharacterized protein {ECO:0000313|EMBL:EST33533.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1238_curated_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16068..16766)
DNA (699bp) protein (233aa)
Transcriptional regulator, ArsR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1A8_CONWI
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADB52071.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_1238_curated_19
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17142..17789
DNA (648bp) protein (216aa)
LexA repressor {ECO:0000313|EMBL:AEV83936.1}; EC=3.4.21.88 {ECO:0000313|EMBL:AEV83936.1};; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00036C4F98
regulatory protein ArsR
Displaying 19 items

View Taxonomy