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scnpilot_solids2_trim150_scaffold_890_curated

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_890_curated_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(407..1615)
DNA (1209bp) protein (403aa)
Catalytic domain of components of various dehydrogenase complexes n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F391_CONWI
catalytic domain of components of various dehydrogenase complexes
Catalytic domain of components of various dehydrogenase complexes {ECO:0000313|EMBL:ADB50371.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_890_curated_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(1615..2589)
DNA (975bp) protein (325aa)
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
Transketolase central region n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD88_CONWI
Transketolase central region {ECO:0000313|EMBL:ADB53480.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_890_curated_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(2586..3548)
DNA (963bp) protein (321aa)
pyruvate dehydrogenase (acetyl-transferring) (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Pyruvate dehydrogenase (Acetyl-transferring) {ECO:0000313|EMBL:ADB49466.1}; EC=1.2.4.1 {ECO:0000313|EMBL:ADB49466.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCJ3_CONWI
scnpilot_solids2_trim150_scaffold_890_curated_4
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3696..4730
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FUE2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX83379.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
scnpilot_solids2_trim150_scaffold_890_curated_5
S_Thermacetogenium_phaeum_55_64, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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4801..5616
DNA (816bp) protein (272aa)
Putative ATP binding protein n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LWS9_THEPS
ATP binding protein
Tax=S_Thermacetogenium_phaeum_55_64
scnpilot_solids2_trim150_scaffold_890_curated_6

Not on your lists

comp(5542..6372)
DNA (831bp) protein (277aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F037_CONWI
Short chain dehydrogenase {ECO:0000313|EMBL:AIA11654.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_solids2_trim150_scaffold_890_curated_7
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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6470..7306
DNA (837bp) protein (279aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EHN10762.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EHN10762.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
enoyl-CoA hydratase n=1 Tax=Patulibacter americanus RepID=UPI0003B6EEBB
enoyl-CoA hydratase/isomerase
scnpilot_solids2_trim150_scaffold_890_curated_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(7274..8767)
DNA (1494bp) protein (498aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase and ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9N2_CONWI
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADB51094.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_890_curated_9
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8791..9465)
DNA (675bp) protein (225aa)
Transcriptional regulator, TetR family n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WXP2_KYRT2
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADG05963.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
scnpilot_solids2_trim150_scaffold_890_curated_10
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(9509..9961)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RG98_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EEP72339.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
scnpilot_solids2_trim150_scaffold_890_curated_11
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9970..11577)
DNA (1608bp) protein (536aa)
CoA ligase (EC:6.2.1.-); K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-]
dicarboxylate-CoA ligase PimA n=1 Tax=Rhodococcus opacus RepID=UPI00029CB332
Plasmid 9, complete sequence {ECO:0000313|EMBL:AHK36177.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
scnpilot_solids2_trim150_scaffold_890_curated_12
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11588..13045)
DNA (1458bp) protein (486aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
betaine-aldehyde dehydrogenase n=1 Tax=Laceyella sacchari RepID=UPI0003B3AD2C
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ADG05968.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
scnpilot_solids2_trim150_scaffold_890_curated_13
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(13042..14415)
DNA (1374bp) protein (458aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Amidase n=1 Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3CC34_STRMB
Amidase {ECO:0000313|EMBL:EMF01546.1}; TaxID=1223523 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
scnpilot_solids2_trim150_scaffold_890_curated_14
unknown

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comp(14412..14597)
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_890_curated_15
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14597..15757)
DNA (1161bp) protein (387aa)
Luciferase n=1 Tax=Sphingobium baderi LL03 RepID=T0GM23_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KAJ32570.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
luciferase-like protein
scnpilot_solids2_trim150_scaffold_890_curated_16
Streptomyces sp. MNU77, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(15754..16515)
DNA (762bp) protein (254aa)
amino acid ABC transporter ATPase n=1 Tax=Streptomyces sp. CNB091 RepID=UPI000361D06C
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
Amino acid ABC transporter ATPase {ECO:0000313|EMBL:KIZ21567.1}; TaxID=1573406 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MNU77.;"
scnpilot_solids2_trim150_scaffold_890_curated_17
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16508..18346)
DNA (1839bp) protein (613aa)
Putative ABC tranpsorter, permease protein (N-ter) and ATP-binding protein (C-ter) branched-chain amino acid transport protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AWW1_AZOBR
putative ABC tranpsorter, permease protein (N-ter) and ATP-binding protein (C-ter); branched-chain amino acid transport protein
Putative ABC tranpsorter, permease protein (N-ter) and ATP-binding protein (C-ter) branched-chain amino acid transport protein {ECO:0000313|EMBL:CCD02370.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
scnpilot_solids2_trim150_scaffold_890_curated_18
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18339..19184)
DNA (846bp) protein (282aa)
ABC transporter permease n=1 Tax=Advenella kashmirensis W13003 RepID=V8QSA0_9BURK
ABC transporter permease {ECO:0000313|EMBL:ETF02208.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
scnpilot_solids2_trim150_scaffold_890_curated_19
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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comp(19237..20442)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2T8U9_BURPP
hypothetical protein; K01999 branched-chain amino acid transport system substrate-binding protein
Tax=RBG_13_Actinobacteria_63_9_curated
scnpilot_solids2_trim150_scaffold_890_curated_20
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20499..20702)
DNA (204bp) protein (68aa)
4-oxalocrotonate tautomerase; K01821 4-oxalocrotonate tautomerase [EC:5.3.2.-]
4-oxalocrotonate tautomerase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020C8_SOLUE
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:AJC62135.1}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
scnpilot_solids2_trim150_scaffold_890_curated_21
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20706..21197)
DNA (492bp) protein (164aa)
Flavin reductase n=1 Tax=Streptomyces sp. CNQ-418 RepID=J7H188_9ACTO
NADH-FMN oxidoreductase {ECO:0000313|EMBL:CEL13357.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_890_curated_22
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21235..22869
DNA (1635bp) protein (545aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:KID29951.1}; EC=6.2.1.- {ECO:0000313|EMBL:KID29951.1};; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
o-succinylbenzoate--CoA ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X390_9PSEU
scnpilot_solids2_trim150_scaffold_890_curated_23
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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22866..23249
DNA (384bp) protein (128aa)
Endoribonuclease L-PSP n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RAK7_AMMDK
endoribonuclease L-PSP; K07567 TdcF protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Displaying 23 items

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